FFCP PHASE1:Hg19::chr2:174891341..174891354,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:174891341..174891354,- | |||
|coexpression_cluster_id=C83 | |||
|description=CAGE_peak_at_chr2:174891341..174891354,- | |description=CAGE_peak_at_chr2:174891341..174891354,- | ||
|id=chr2:174891341..174891354,- | |id=chr2:174891341..174891354,- | ||
|ontology_enrichment_celltype=CL:0002541!1.29e-11!3;CL:0000349!1.38e-11!3;CL:0002577!1.38e-11!3;CL:0002536!4.16e-08!2;CL:0002195!7.44e-08!2;CL:0002571!7.44e-08!2;CL:0002588!2.38e-07!2 | |ontology_enrichment_celltype=CL:0002541!1.29e-11!3;CL:0000349!1.38e-11!3;CL:0002577!1.38e-11!3;CL:0002536!4.16e-08!2;CL:0002195!7.44e-08!2;CL:0002571!7.44e-08!2;CL:0002588!2.38e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.12e-46;19!CL:0002541;9.32e-43;3!CL:0002577;2.20e-42;3!CL:0000039;4.36e-19;7!CL:0000586;4.36e-19;7!CL:0002536;1.79e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,9.11e-47,19;CL:0002541,9.33e-43,3;CL:0002577,1.24e-42,3;CL:0000039,5.24e-19,7;CL:0000586,5.24e-19,7;CL:0002536,1.86e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.24e-15;1 | |||
|ontology_enrichment_disease=DOID:2394!7.92e-08!14 | |ontology_enrichment_disease=DOID:2394!7.92e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:1799;8.63e-16;1!DOID:10165;8.63e-16;1!DOID:1798;8.63e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,8.63e-16,1;DOID:10165,8.63e-16,1;DOID:1798,8.63e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!3.53e-34!14;UBERON:0000158!3.53e-34!14;UBERON:0000478!1.38e-29!24;UBERON:0003124!8.40e-25!7;UBERON:0001987!6.27e-15!4;UBERON:0004340!6.27e-15!4;UBERON:0004923!4.84e-13!57;UBERON:0000305!3.15e-12!7;UBERON:0000476!1.29e-11!3;UBERON:0000920!1.29e-11!3;UBERON:0004871!1.18e-10!8;UBERON:0002119!7.85e-08!4;UBERON:0004531!7.85e-08!4 | |ontology_enrichment_uberon=UBERON:0005631!3.53e-34!14;UBERON:0000158!3.53e-34!14;UBERON:0000478!1.38e-29!24;UBERON:0003124!8.40e-25!7;UBERON:0001987!6.27e-15!4;UBERON:0004340!6.27e-15!4;UBERON:0004923!4.84e-13!57;UBERON:0000305!3.15e-12!7;UBERON:0000476!1.29e-11!3;UBERON:0000920!1.29e-11!3;UBERON:0004871!1.18e-10!8;UBERON:0002119!7.85e-08!4;UBERON:0004531!7.85e-08!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;3.60e-56;4!UBERON:0000478;1.22e-46;24!UBERON:0003124;9.32e-43;3!UBERON:0000920;9.32e-43;3!UBERON:0005631;1.88e-35;10!UBERON:0000158;1.88e-35;10!UBERON:0000305;3.37e-09;7!UBERON:0000077;1.25e-08;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,1.83e-97,7;UBERON:0005631,1.62e-80,14;UBERON:0000158,1.62e-80,14;UBERON:0001987,1.89e-56,4;UBERON:0004340,1.89e-56,4;UBERON:0000478,9.82e-47,24;UBERON:0000920,9.33e-43,3;UBERON:0004923,1.59e-16,66;UBERON:0000995,4.50e-11,21;UBERON:0005795,1.39e-10,22;UBERON:0003975,1.39e-10,22;UBERON:0004175,2.42e-09,25;UBERON:0000305,3.44e-09,7;UBERON:0004871,3.77e-08,8;UBERON:0000077,4.37e-08,29 | |||
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|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,3.27662058195258,0.527533956456907,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689491361473237,0,0,0,0,0,1.22433556948361,0.320929027076094,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0.714889968290738,0.542621605391443,0.823240336780769,0,0.355391948742546,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,1.5156378572313,1.66435439510497,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0.196498082026242,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,9.50286978664444,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,1.1528195219403,7.27036919719154,10.1042055887468,4.14701507651495,1.19076871422421,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0.155262956876259,0.829412415681711,0.265841714557995,0,0.901545653983311,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0.214441591374926,0,0,0.463044948647668,0.244736704506468,0,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,6.80957405651698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54809480650555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:174891341..174891354,- | |short_description=p@chr2:174891341..174891354,- | ||
}} | }} |
Latest revision as of 02:37, 29 July 2015
Short description: | p@chr2:174891341..174891354, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:174891341..174891354, - |
Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 9.11e-47 | 19 |
chorionic membrane mesenchymal stem cell | 9.33e-43 | 3 |
placental epithelial cell | 1.24e-42 | 3 |
germ line cell | 5.24e-19 | 7 |
germ cell | 5.24e-19 | 7 |
amniotic epithelial cell | 1.86e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
chorion | 1.83e-97 | 7 |
extraembryonic membrane | 1.62e-80 | 14 |
membranous layer | 1.62e-80 | 14 |
placenta | 1.89e-56 | 4 |
allantois | 1.89e-56 | 4 |
extraembryonic structure | 9.82e-47 | 24 |
egg chorion | 9.33e-43 | 3 |
organ component layer | 1.59e-16 | 66 |
uterus | 4.50e-11 | 21 |
embryonic uterus | 1.39e-10 | 22 |
internal female genitalia | 1.39e-10 | 22 |
internal genitalia | 2.42e-09 | 25 |
amnion | 3.44e-09 | 7 |
somatic layer of lateral plate mesoderm | 3.77e-08 | 8 |
mixed endoderm/mesoderm-derived structure | 4.37e-08 | 29 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 8.63e-16 | 1 |
endocrine pancreas cancer | 8.63e-16 | 1 |
pancreatic endocrine carcinoma | 8.63e-16 | 1 |