FFCP PHASE1:Hg19::chr9:110045537..110045572,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5887 | |EntrezGene=5887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9813 | |HGNC=9813 | ||
|TSSclassifier=strong | |||
|UniProt=P54727 | |UniProt=P54727 | ||
|association_with_transcript=0bp_to_ENST00000358015,uc004bde.2,uc011lwa.1_5end | |association_with_transcript=0bp_to_ENST00000358015,uc004bde.2,uc011lwa.1_5end | ||
|cluster_id=chr9:110045537..110045572,+ | |||
|description=CAGE_peak_1_at_RAD23B_5end | |description=CAGE_peak_1_at_RAD23B_5end | ||
|id=chr9:110045537..110045572,+ | |id=chr9:110045537..110045572,+ | ||
|ontology_enrichment_celltype=CL:0000548!3.90e-08!679;CL:0000004!3.90e-08!679;CL:0000255!3.90e-08!679;CL:0000057!8.35e-08!75;CL:0000012!2.39e-07!682;CL:0000066!3.36e-07!254 | |ontology_enrichment_celltype=CL:0000548!3.90e-08!679;CL:0000004!3.90e-08!679;CL:0000255!3.90e-08!679;CL:0000057!8.35e-08!75;CL:0000012!2.39e-07!682;CL:0000066!3.36e-07!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.27e-08,76;CL:0000066,4.83e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!7.54e-11!95;UBERON:0004119!1.47e-08!169;UBERON:0000925!1.47e-08!169;UBERON:0006595!1.47e-08!169;UBERON:0002100!3.12e-08!216;UBERON:0001007!7.73e-08!155;UBERON:0001555!7.73e-08!155;UBERON:0007026!7.73e-08!155;UBERON:0000466!7.21e-07!126 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,8.70e-11,99;UBERON:0002100,3.54e-08,199;UBERON:0004119,3.61e-07,160;UBERON:0000925,3.61e-07,160;UBERON:0006595,3.61e-07,160 | |||
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| ||
|short_description=p1@RAD23B | |short_description=p1@RAD23B | ||
}} | }} |
Latest revision as of 00:43, 20 September 2015
Short description: | p1@RAD23B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RAD23B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000358015, uc004bde.2, uc011lwa.1_5end |
EntrezGene: | RAD23B |
HGNC: | 9813 |
UniProt: | P54727 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.27e-08 | 76 |
epithelial cell | 4.83e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
surface structure | 8.70e-11 | 99 |
trunk | 3.54e-08 | 199 |
endoderm-derived structure | 3.61e-07 | 160 |
endoderm | 3.61e-07 | 160 |
presumptive endoderm | 3.61e-07 | 160 |