FFCP PHASE1:Hg19::chr2:235157093..235157098,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:235157093..235157098,+ | |||
|coexpression_cluster_id=C412 | |||
|description=CAGE_peak_at_chr2:235157093..235157098,+ | |description=CAGE_peak_at_chr2:235157093..235157098,+ | ||
|id=chr2:235157093..235157098,+ | |id=chr2:235157093..235157098,+ | ||
|ontology_enrichment_celltype=CL:1000507!3.21e-19!12;CL:1000494!3.21e-19!12;CL:1000497!1.11e-15!18;CL:0002518!1.11e-15!18;CL:1000449!4.56e-14!16;CL:0000239!9.87e-13!3;CL:1000615!9.87e-13!3;CL:0002306!9.87e-13!3;CL:0002076!7.94e-12!43;CL:0000066!2.66e-11!254;CL:0002149!1.07e-10!6;CL:0002255!1.07e-10!6;CL:0002681!4.64e-10!13;CL:0002584!4.64e-10!13;CL:0000223!3.35e-09!59 | |ontology_enrichment_celltype=CL:1000507!3.21e-19!12;CL:1000494!3.21e-19!12;CL:1000497!1.11e-15!18;CL:0002518!1.11e-15!18;CL:1000449!4.56e-14!16;CL:0000239!9.87e-13!3;CL:1000615!9.87e-13!3;CL:0002306!9.87e-13!3;CL:0002076!7.94e-12!43;CL:0000066!2.66e-11!254;CL:0002149!1.07e-10!6;CL:0002255!1.07e-10!6;CL:0002681!4.64e-10!13;CL:0002584!4.64e-10!13;CL:0000223!3.35e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0000239;2.95e-21;3!CL:1000615;2.95e-21;3!CL:0002306;2.95e-21;3!CL:0002149;2.02e-11;6!CL:0002255;2.02e-11;6!CL:1000507;4.96e-07;10!CL:1000494;4.96e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.17e-21,3;CL:1000615,2.17e-21,3;CL:0002306,2.17e-21,3;CL:0002149,2.02e-11,6;CL:0002255,2.02e-11,6;CL:1000507,4.52e-07,10;CL:1000494,4.52e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0005795;3.33e-07;10 | |||
|ontology_enrichment_disease=DOID:3001!1.07e-10!6 | |ontology_enrichment_disease=DOID:3001!1.07e-10!6 | ||
|ontology_enrichment_disease_v019=DOID:6193;6.47e-17;1!DOID:3001;2.02e-11;6!DOID:3350;4.02e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,6.47e-17,1;DOID:3001,2.02e-11,6;DOID:3350,4.02e-09,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0006853;2.95e-21;3!UBERON:0007685;2.95e-21;3!UBERON:0004134;2.95e-21;3!UBERON:0004211;4.96e-07;10!UBERON:0009773;4.96e-07;10!UBERON:0001231;4.96e-07;10!UBERON:0004810;4.96e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,2.17e-21,3;UBERON:0007685,2.17e-21,3;UBERON:0004134,2.17e-21,3;UBERON:0004810,4.52e-07,10 | |||
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| ||
|short_description=p@chr2:235157093..235157098,+ | |short_description=p@chr2:235157093..235157098,+ | ||
}} | }} |
Latest revision as of 07:59, 29 July 2015
Short description: | p@chr2:235157093..235157098, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:235157093..235157098, + |
Coexpression cluster: | C412_serous_breast_papillotubular_ductus_seminal_kidney_clear |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.17e-21 | 3 |
kidney cortex tubule cell | 2.17e-21 | 3 |
epithelial cell of proximal tubule | 2.17e-21 | 3 |
epithelial cell of uterus | 2.02e-11 | 6 |
stromal cell of endometrium | 2.02e-11 | 6 |
kidney tubule cell | 4.52e-07 | 10 |
nephron tubule epithelial cell | 4.52e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 2.17e-21 | 3 |
region of nephron tubule | 2.17e-21 | 3 |
proximal tubule | 2.17e-21 | 3 |
nephron tubule epithelium | 4.52e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 6.47e-17 | 1 |
female reproductive endometrioid cancer | 2.02e-11 | 6 |
mesenchymal cell neoplasm | 4.02e-09 | 2 |