FFCP PHASE1:Hg19::chr2:238378261..238378264,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:238378261..238378264,- | |||
|coexpression_cluster_id=C225 | |||
|description=CAGE_peak_at_chr2:238378261..238378264,- | |description=CAGE_peak_at_chr2:238378261..238378264,- | ||
|id=chr2:238378261..238378264,- | |id=chr2:238378261..238378264,- | ||
|ontology_enrichment_celltype=CL:0000763!4.34e-12!112;CL:0000049!4.34e-12!112;CL:0002032!1.08e-10!165;CL:0000837!1.08e-10!165;CL:0000037!6.37e-10!172;CL:0000566!6.37e-10!172;CL:0002009!5.15e-09!65;CL:0000988!6.25e-09!182;CL:0002194!2.88e-08!63;CL:0000576!2.88e-08!63;CL:0000040!2.88e-08!63;CL:0000559!2.88e-08!63;CL:0000557!6.51e-08!71;CL:0000840!1.80e-07!5;CL:0001029!1.80e-07!5;CL:0000839!4.52e-07!70 | |ontology_enrichment_celltype=CL:0000763!4.34e-12!112;CL:0000049!4.34e-12!112;CL:0002032!1.08e-10!165;CL:0000837!1.08e-10!165;CL:0000037!6.37e-10!172;CL:0000566!6.37e-10!172;CL:0002009!5.15e-09!65;CL:0000988!6.25e-09!182;CL:0002194!2.88e-08!63;CL:0000576!2.88e-08!63;CL:0000040!2.88e-08!63;CL:0000559!2.88e-08!63;CL:0000557!6.51e-08!71;CL:0000840!1.80e-07!5;CL:0001029!1.80e-07!5;CL:0000839!4.52e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0002379;2.82e-21;1!CL:0000307;7.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,2.82e-21,1;CL:0000068,7.76e-08,3;CL:0000069,7.76e-08,3;CL:0000307,7.76e-08,3;CL:0000377,7.76e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000377;7.26e-08;3 | |||
|ontology_enrichment_disease=DOID:2531!1.75e-15!51;DOID:0060083!1.75e-15!51;DOID:1036!7.97e-13!8;DOID:0050686!1.20e-12!137;DOID:162!1.09e-11!235;DOID:14566!3.17e-11!239;DOID:1240!3.36e-11!39;DOID:8692!6.27e-11!31;DOID:0060058!3.78e-07!10;DOID:1909!8.83e-07!2 | |ontology_enrichment_disease=DOID:2531!1.75e-15!51;DOID:0060083!1.75e-15!51;DOID:1036!7.97e-13!8;DOID:0050686!1.20e-12!137;DOID:162!1.09e-11!235;DOID:14566!3.17e-11!239;DOID:1240!3.36e-11!39;DOID:8692!6.27e-11!31;DOID:0060058!3.78e-07!10;DOID:1909!8.83e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:2355;1.88e-21;1!DOID:3620;2.82e-21;1!DOID:3565;2.82e-21;1!DOID:4074;1.82e-11;2!DOID:4905;1.82e-11;2!DOID:3498;1.82e-11;2!DOID:74;2.02e-11;2!DOID:1036;7.30e-11;8!DOID:0060058;5.15e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,1.88e-21,1;DOID:3620,2.82e-21,1;DOID:3565,2.82e-21,1;DOID:4074,1.82e-11,2;DOID:4905,1.82e-11,2;DOID:3498,1.82e-11,2;DOID:74,2.02e-11,2;DOID:0050686,3.02e-11,137;DOID:1036,7.30e-11,8;DOID:2531,6.98e-10,51;DOID:0060083,6.98e-10,51;DOID:0060058,5.15e-09,10 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.34523684004081,0.284338464974843,0,0,0,0,0.223915474239924,0.647787332037959,0,0,0.755751887377619,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0.272906150057846,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614481528616916,0.223676107892416,0,0,0.556812347790485,0,0.270455678475983,0,1.4098700508785,0.935702702041099,0.146508179271894,0,0.445773537109913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0.31396051279005,0,0.451191321234361,0.19606253431774,0.671286347903371,1.3282761290693,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,48.3132955272845,0,0,0,0,0,0.103688191397247,0,0,0,0,0,1.8027707491708,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,1.02956998717179,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,32.7685795094586,0,0,0,0,0,0.2249738915515,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38068310173083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0.124980407962107,0.454947352624943,0.285465333544967,3.52898729547258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0,0,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588901401691458,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,0.471353094203252,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:238378261..238378264,- | |short_description=p@chr2:238378261..238378264,- | ||
}} | }} |
Latest revision as of 08:12, 29 July 2015
Short description: | p@chr2:238378261..238378264, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:238378261..238378264, - |
Coexpression cluster: | C225_ductal_alveolar_giant_prostate_salivary_squamous_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 2.82e-21 | 1 |
duct epithelial cell | 7.76e-08 | 3 |
branched duct epithelial cell | 7.76e-08 | 3 |
tracheal epithelial cell | 7.76e-08 | 3 |
tracheoblast | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
anemia | 1.88e-21 | 1 |
central nervous system cancer | 2.82e-21 | 1 |
meningioma | 2.82e-21 | 1 |
pancreas adenocarcinoma | 1.82e-11 | 2 |
pancreatic carcinoma | 1.82e-11 | 2 |
pancreatic ductal adenocarcinoma | 1.82e-11 | 2 |
hematopoietic system disease | 2.02e-11 | 2 |
organ system cancer | 3.02e-11 | 137 |
chronic leukemia | 7.30e-11 | 8 |
hematologic cancer | 6.98e-10 | 51 |
immune system cancer | 6.98e-10 | 51 |
lymphoma | 5.15e-09 | 10 |