FFCP PHASE1:Hg19::chr2:242350325..242350332,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9855 | |EntrezGene=9855 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16460 | |HGNC=16460 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-23bp_to_ENST00000471447_5end | |association_with_transcript=-23bp_to_ENST00000471447_5end | ||
|cluster_id=chr2:242350325..242350332,+ | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_8_at_FARP2_5end | |description=CAGE_peak_8_at_FARP2_5end | ||
|id=chr2:242350325..242350332,+ | |id=chr2:242350325..242350332,+ | ||
|ontology_enrichment_celltype=CL:0000148!6.12e-47!10;CL:0000541!6.12e-47!10;CL:0000147!2.26e-33!14;CL:0000710!3.54e-23!20;CL:0000075!5.36e-17!27;CL:0002567!3.88e-14!3;CL:0002077!8.84e-14!33;CL:0000325!1.50e-11!39;CL:0002566!2.53e-11!1;CL:0000333!2.09e-10!41;CL:0002274!1.43e-08!5;CL:0000457!1.43e-08!5;CL:0002191!1.43e-08!5;CL:0000097!1.43e-08!5;CL:0000831!1.43e-08!5;CL:0002028!1.43e-08!5;CL:0000133!4.10e-07!59 | |ontology_enrichment_celltype=CL:0000148!6.12e-47!10;CL:0000541!6.12e-47!10;CL:0000147!2.26e-33!14;CL:0000710!3.54e-23!20;CL:0000075!5.36e-17!27;CL:0002567!3.88e-14!3;CL:0002077!8.84e-14!33;CL:0000325!1.50e-11!39;CL:0002566!2.53e-11!1;CL:0000333!2.09e-10!41;CL:0002274!1.43e-08!5;CL:0000457!1.43e-08!5;CL:0002191!1.43e-08!5;CL:0000097!1.43e-08!5;CL:0000831!1.43e-08!5;CL:0002028!1.43e-08!5;CL:0000133!4.10e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000148;2.84e-98;10!CL:0000147;1.65e-70;14!CL:0002567;2.86e-53;3!CL:0000710;1.16e-49;20!CL:0002566;1.48e-40;1!CL:0000075;4.92e-37;27!CL:0002077;1.41e-27;34!CL:0000149;3.10e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.85e-98,10;CL:0000541,2.85e-98,10;CL:0000147,1.65e-70,14;CL:0002567,2.87e-53,3;CL:0000710,1.16e-49,20;CL:0002566,6.62e-41,1;CL:0000075,4.92e-37,27;CL:0002077,1.36e-29,34;CL:0000333,1.42e-23,41;CL:0000133,7.61e-17,59;CL:0000221,5.20e-14,72;CL:0000149,3.10e-11,4 | |||
|ontology_enrichment_development_v019=CL:0000133;1.27e-09;59!CL:0000221;4.72e-07;72 | |||
|ontology_enrichment_disease=DOID:1909!3.02e-20!2 | |ontology_enrichment_disease=DOID:1909!3.02e-20!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002336!9.05e-11!1;UBERON:0001018!9.05e-11!1;UBERON:0002473!9.05e-11!1;UBERON:0005340!9.05e-11!1;UBERON:0002316!9.05e-11!1;UBERON:0003544!9.05e-11!1;UBERON:0001020!9.05e-11!1;UBERON:0005970!9.05e-11!1;UBERON:0002437!9.05e-11!1;UBERON:0002022!1.77e-10!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p8@FARP2 | |short_description=p8@FARP2 | ||
}} | }} |
Latest revision as of 10:37, 16 September 2015
Short description: | p8@FARP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_FARP2_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -23bp_to_ENST00000471447_5end |
EntrezGene: | FARP2 |
HGNC: | 16460 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.85e-98 | 10 |
melanoblast | 2.85e-98 | 10 |
pigment cell | 1.65e-70 | 14 |
light melanocyte | 2.87e-53 | 3 |
neurecto-epithelial cell | 1.16e-49 | 20 |
dark melanocyte | 6.62e-41 | 1 |
columnar/cuboidal epithelial cell | 4.92e-37 | 27 |
ecto-epithelial cell | 1.36e-29 | 34 |
migratory neural crest cell | 1.42e-23 | 41 |
neurectodermal cell | 7.61e-17 | 59 |
ectodermal cell | 5.20e-14 | 72 |
visual pigment cell | 3.10e-11 | 4 |