FFCP PHASE1:Hg19::chr9:72673..72678,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-19bp_to_uc003zfx.2_5end | |association_with_transcript=-19bp_to_uc003zfx.2_5end | ||
|cluster_id=chr9:72673..72678,+ | |||
|description=CAGE_peak_1_at_uc003zfx.2_5end | |description=CAGE_peak_1_at_uc003zfx.2_5end | ||
|id=chr9:72673..72678,+ | |id=chr9:72673..72678,+ | ||
|ontology_enrichment_celltype=CL:0002622!5.56e-13!3 | |ontology_enrichment_celltype=CL:0002622!5.56e-13!3 | ||
|ontology_enrichment_celltype_v019=CL:1000487;2.37e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000487,2.74e-15,2 | |||
|ontology_enrichment_development_v019=UBERON:0009847;6.73e-11;3!UBERON:0003353;6.73e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;1.54e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.54e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0000162!2.05e-18!14;UBERON:0001353!2.05e-18!14;UBERON:0000163!2.05e-18!14;UBERON:0006866!2.05e-18!14;UBERON:0000164!2.05e-18!14;UBERON:0000931!2.05e-18!14;UBERON:0002367!3.60e-18!11;UBERON:0010147!3.60e-18!11;UBERON:0009846!3.60e-18!11;UBERON:0003353!3.60e-18!11;UBERON:0004902!3.60e-18!11;UBERON:0003820!3.60e-18!11;UBERON:0009847!3.60e-18!11;UBERON:0003101!2.07e-17!22;UBERON:0000079!2.07e-17!22;UBERON:0004122!4.27e-17!15;UBERON:0001046!1.14e-16!19;UBERON:0003937!1.42e-16!12;UBERON:0005399!1.42e-16!12;UBERON:0007023!1.24e-09!115;UBERON:0003064!1.36e-09!37;UBERON:0005156!7.39e-08!59;UBERON:0000990!7.39e-08!59;UBERON:0001155!1.17e-07!9;UBERON:0006554!1.23e-07!44;UBERON:0005153!1.38e-07!37;UBERON:0001008!1.99e-07!45;UBERON:0004921!3.74e-07!129;UBERON:0004185!3.74e-07!129;UBERON:0001007!8.01e-07!155;UBERON:0001555!8.01e-07!155;UBERON:0007026!8.01e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002367;2.55e-11;11!UBERON:0010147;2.55e-11;11!UBERON:0002106;8.17e-11;3!UBERON:0003937;1.85e-10;12!UBERON:0005399;1.85e-10;12!UBERON:0000077;3.47e-10;27!UBERON:0004177;5.38e-07;5!UBERON:0005057;5.38e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002367,2.68e-11,11;UBERON:0010147,2.68e-11,11;UBERON:0009846,2.68e-11,11;UBERON:0003353,2.68e-11,11;UBERON:0004902,2.68e-11,11;UBERON:0003820,2.68e-11,11;UBERON:0009847,2.68e-11,11;UBERON:0002106,8.99e-11,3;UBERON:0004854,8.99e-11,3;UBERON:0009034,8.99e-11,3;UBERON:0002095,8.99e-11,3;UBERON:0004782,8.99e-11,3;UBERON:0003281,8.99e-11,3;UBERON:0009664,8.99e-11,3;UBERON:0002296,8.99e-11,3;UBERON:0005602,8.99e-11,3;UBERON:0001179,8.99e-11,3;UBERON:0006293,8.99e-11,3;UBERON:0003937,1.94e-10,12;UBERON:0005399,1.94e-10,12;UBERON:0000077,1.66e-09,29;UBERON:0000162,4.38e-09,14;UBERON:0001353,4.38e-09,14;UBERON:0000163,4.38e-09,14;UBERON:0006866,4.38e-09,14;UBERON:0000164,4.38e-09,14;UBERON:0000931,4.38e-09,14;UBERON:0004122,1.53e-08,15;UBERON:0001046,6.19e-07,19 | |||
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| ||
|short_description=p1@uc003zfx.2 | |short_description=p1@uc003zfx.2 | ||
}} | }} |
Latest revision as of 02:28, 1 August 2015
Short description: | p1@uc003zfx.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc003zfx.2_5end |
Coexpression cluster: | NA |
Association with transcript: | -19bp_to_uc003zfx.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of prostate | 2.74e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
prostate gland | 2.68e-11 | 11 |
male accessory sex gland | 2.68e-11 | 11 |
embryonic cloacal epithelium | 2.68e-11 | 11 |
epithelium of hindgut | 2.68e-11 | 11 |
urogenital sinus epithelium | 2.68e-11 | 11 |
prostate bud | 2.68e-11 | 11 |
prostate field | 2.68e-11 | 11 |
spleen | 8.99e-11 | 3 |
gastrointestinal system mesentery | 8.99e-11 | 3 |
stomach region | 8.99e-11 | 3 |
mesentery | 8.99e-11 | 3 |
gastrointestinal system serosa | 8.99e-11 | 3 |
mesentery of stomach | 8.99e-11 | 3 |
gut mesentery | 8.99e-11 | 3 |
dorsal mesentery | 8.99e-11 | 3 |
dorsal mesogastrium | 8.99e-11 | 3 |
peritoneal cavity | 8.99e-11 | 3 |
spleen primordium | 8.99e-11 | 3 |
sex gland | 1.94e-10 | 12 |
male reproductive gland | 1.94e-10 | 12 |
mixed endoderm/mesoderm-derived structure | 1.66e-09 | 29 |
cloaca | 4.38e-09 | 14 |
anal region | 4.38e-09 | 14 |
embryonic cloaca | 4.38e-09 | 14 |
terminal part of digestive tract | 4.38e-09 | 14 |
primitive urogenital sinus | 4.38e-09 | 14 |
proctodeum | 4.38e-09 | 14 |
genitourinary system | 1.53e-08 | 15 |
hindgut | 6.19e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.54e-15 | 2 |