FFCP PHASE1:Hg19::chr3:105974795..105974822,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:105974795..105974822,- | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_at_chr3:105974795..105974822,- | |description=CAGE_peak_at_chr3:105974795..105974822,- | ||
|id=chr3:105974795..105974822,- | |id=chr3:105974795..105974822,- | ||
|ontology_enrichment_celltype=CL:0000945!5.73e-120!24;CL:0000826!5.73e-120!24;CL:0000236!7.95e-67!14;CL:0000542!1.66e-57!53;CL:0000051!1.66e-57!53;CL:0000838!2.97e-53!52;CL:0002087!2.14e-25!119;CL:0000738!5.86e-21!140;CL:0002031!9.01e-20!124;CL:0000037!2.91e-16!172;CL:0000566!2.91e-16!172;CL:0002032!1.78e-15!165;CL:0000837!1.78e-15!165;CL:0000988!3.94e-15!182;CL:0000785!1.93e-14!2;CL:0000955!1.93e-14!2;CL:0000818!1.93e-14!2;CL:0000954!1.93e-14!2;CL:0000816!1.93e-14!2;CL:0000817!6.28e-10!3;CL:0000946!2.04e-08!1;CL:0000786!2.04e-08!1;CL:0000980!2.04e-08!1;CL:0000819!9.94e-08!1 | |ontology_enrichment_celltype=CL:0000945!5.73e-120!24;CL:0000826!5.73e-120!24;CL:0000236!7.95e-67!14;CL:0000542!1.66e-57!53;CL:0000051!1.66e-57!53;CL:0000838!2.97e-53!52;CL:0002087!2.14e-25!119;CL:0000738!5.86e-21!140;CL:0002031!9.01e-20!124;CL:0000037!2.91e-16!172;CL:0000566!2.91e-16!172;CL:0002032!1.78e-15!165;CL:0000837!1.78e-15!165;CL:0000988!3.94e-15!182;CL:0000785!1.93e-14!2;CL:0000955!1.93e-14!2;CL:0000818!1.93e-14!2;CL:0000954!1.93e-14!2;CL:0000816!1.93e-14!2;CL:0000817!6.28e-10!3;CL:0000946!2.04e-08!1;CL:0000786!2.04e-08!1;CL:0000980!2.04e-08!1;CL:0000819!9.94e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.58e-91;24!CL:0000542;8.02e-26;53!CL:0000236;3.76e-25;13!CL:0000946;7.13e-15;1!CL:0000786;7.13e-15;1!CL:0002087;3.59e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.49e-91,24;CL:0000826,2.49e-91,24;CL:0000542,2.74e-47,53;CL:0000051,2.74e-47,53;CL:0000838,1.54e-41,52;CL:0000236,1.35e-33,14;CL:0002087,7.13e-21,115;CL:0000738,1.89e-17,136;CL:0002031,4.36e-17,120;CL:0000946,7.13e-15,1;CL:0000786,7.13e-15,1;CL:0000980,7.13e-15,1;CL:0002032,1.60e-14,161;CL:0000837,1.60e-14,161;CL:0000037,7.40e-14,168;CL:0000988,4.45e-13,177;CL:0000785,4.38e-08,2;CL:0000955,4.38e-08,2;CL:0000818,4.38e-08,2;CL:0000954,4.38e-08,2;CL:0000816,4.38e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000051;8.02e-26;53!CL:0000954;4.38e-08;2 | |||
|ontology_enrichment_disease=DOID:0060058!1.55e-16!10;DOID:630!3.11e-08!1;DOID:0050177!3.11e-08!1;DOID:0050427!3.11e-08!1;DOID:2355!3.34e-08!1;DOID:12603!4.11e-08!1;DOID:4960!7.59e-08!1;DOID:0070004!7.59e-08!1;DOID:0060073!9.94e-08!1;DOID:8675!9.94e-08!1 | |ontology_enrichment_disease=DOID:0060058!1.55e-16!10;DOID:630!3.11e-08!1;DOID:0050177!3.11e-08!1;DOID:0050427!3.11e-08!1;DOID:2355!3.34e-08!1;DOID:12603!4.11e-08!1;DOID:4960!7.59e-08!1;DOID:0070004!7.59e-08!1;DOID:0060073!9.94e-08!1;DOID:8675!9.94e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:630;1.41e-14;1!DOID:0050177;1.41e-14;1!DOID:0050427;1.41e-14;1!DOID:2355;1.41e-14;1!DOID:12603;2.57e-14;1!DOID:0060058;1.65e-12;10!DOID:74;6.15e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.61e-14,1;DOID:0050177,1.61e-14,1;DOID:0050427,1.61e-14,1;DOID:2355,1.84e-14,1;DOID:12603,2.75e-14,1;DOID:0060058,1.89e-12,10;DOID:74,7.03e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002372!8.69e-08!1;UBERON:0001961!8.69e-08!1;UBERON:0001744!8.69e-08!1;UBERON:0001735!8.69e-08!1;UBERON:0000178!3.93e-07!15;UBERON:0000179!3.93e-07!15;UBERON:0000463!3.93e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1563572392009,9.93417132344344,11.2556417278561,0,0,0,0,0,0,1.08454080812422,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,2.73069305631066,0.889509253863555,0.853460445133014,0.800791974072025,1.72425731986345,2.64417949113945,2.86216126360609,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0,0,0,0,0.540031437238115,0,0,0,0,1.67222857613147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81562896929315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2015066337104,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.41208109157188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29629282327052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26940821205835,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,2.24397944612263 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1563572392009,9.93417132344344,11.2556417278561,0,0,0,0,0,0,1.08454080812422,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,2.73069305631066,0.889509253863555,0.853460445133014,0.800791974072025,1.72425731986345,2.64417949113945,2.86216126360609,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0,0,0,0,0.540031437238115,0,0,0,0,1.67222857613147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81562896929315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2015066337104,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.41208109157188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29629282327052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26940821205835,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,2.24397944612263 | ||
|short_description=p@chr3:105974795..105974822,- | |short_description=p@chr3:105974795..105974822,- | ||
}} | }} |
Latest revision as of 13:58, 29 July 2015
Short description: | p@chr3:105974795..105974822, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:105974795..105974822, - |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.49e-91 | 24 |
pro-B cell | 2.49e-91 | 24 |
lymphocyte | 2.74e-47 | 53 |
common lymphoid progenitor | 2.74e-47 | 53 |
lymphoid lineage restricted progenitor cell | 1.54e-41 | 52 |
B cell | 1.35e-33 | 14 |
nongranular leukocyte | 7.13e-21 | 115 |
leukocyte | 1.89e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 4.36e-17 | 120 |
antibody secreting cell | 7.13e-15 | 1 |
plasma cell | 7.13e-15 | 1 |
plasmablast | 7.13e-15 | 1 |
hematopoietic oligopotent progenitor cell | 1.60e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.60e-14 | 161 |
hematopoietic stem cell | 7.40e-14 | 168 |
hematopoietic cell | 4.45e-13 | 177 |
mature B cell | 4.38e-08 | 2 |
pre-B-II cell | 4.38e-08 | 2 |
transitional stage B cell | 4.38e-08 | 2 |
small pre-B-II cell | 4.38e-08 | 2 |
immature B cell | 4.38e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.61e-14 | 1 |
monogenic disease | 1.61e-14 | 1 |
xeroderma pigmentosum | 1.61e-14 | 1 |
anemia | 1.84e-14 | 1 |
acute leukemia | 2.75e-14 | 1 |
lymphoma | 1.89e-12 | 10 |
hematopoietic system disease | 7.03e-08 | 2 |