Personal tools

FFCP PHASE1:Hg19::chr14:78638636..78638661,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr14:78638636..78638661,+ |short_description=p@chr14:78638636..78638661,+ |description=CAGE_peak_at_chr14:78638636..78638661,+ |association_with_transcript=NA ...")
 
No edit summary
 
(10 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr14:78638636..78638661,+
|DHSsupport=supported 
|short_description=p@chr14:78638636..78638661,+
|DPIdataset=robust
|description=CAGE_peak_at_chr14:78638636..78638661,+
|association_with_transcript=NA
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr14:78638636..78638661,+
|coexpression_cluster_id=C35
|description=CAGE_peak_at_chr14:78638636..78638661,+
|id=chr14:78638636..78638661,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_development_v019=UBERON:0010122;4.47e-45;2!UBERON:0006601;6.76e-10;82!UBERON:0006215;9.66e-09;3!UBERON:0006241;1.35e-08;3!UBERON:0003057;1.35e-08;3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.56e-105!57;UBERON:0005068!1.56e-105!57;UBERON:0006241!1.56e-105!57;UBERON:0007135!1.56e-105!57;UBERON:0002616!4.33e-91!59;UBERON:0002020!7.40e-87!34;UBERON:0003528!7.40e-87!34;UBERON:0001893!3.76e-86!34;UBERON:0002791!1.51e-82!33;UBERON:0001017!8.91e-82!82;UBERON:0002780!1.02e-81!41;UBERON:0001890!1.02e-81!41;UBERON:0006240!1.02e-81!41;UBERON:0005743!1.81e-81!86;UBERON:0000955!6.28e-80!69;UBERON:0006238!6.28e-80!69;UBERON:0003080!1.20e-79!42;UBERON:0001869!3.35e-79!32;UBERON:0003075!1.55e-78!86;UBERON:0007284!1.55e-78!86;UBERON:0002346!1.10e-74!90;UBERON:0000073!4.61e-73!94;UBERON:0001016!4.61e-73!94;UBERON:0002619!5.96e-60!22;UBERON:0003056!1.09e-56!61;UBERON:0001950!9.75e-53!20;UBERON:0000956!1.74e-52!25;UBERON:0000203!1.74e-52!25;UBERON:0007023!3.44e-51!115;UBERON:0000033!1.75e-46!123;UBERON:0000153!6.08e-44!129;UBERON:0007811!6.08e-44!129;UBERON:0004121!3.61e-39!169;UBERON:0000924!4.57e-38!173;UBERON:0006601!4.57e-38!173;UBERON:0002308!2.28e-37!9;UBERON:0000125!2.28e-37!9;UBERON:0002420!2.93e-37!9;UBERON:0007245!2.93e-37!9;UBERON:0010009!2.93e-37!9;UBERON:0010011!2.93e-37!9;UBERON:0000454!2.93e-37!9;UBERON:0009663!1.84e-29!7;UBERON:0003076!2.00e-25!15;UBERON:0003057!2.00e-25!15;UBERON:0000025!3.74e-25!194;UBERON:0000349!6.61e-21!5;UBERON:0004733!1.56e-20!12;UBERON:0002028!1.56e-20!12;UBERON:0007277!1.56e-20!12;UBERON:0001872!2.25e-20!5;UBERON:0004732!7.46e-19!13;UBERON:0004111!1.56e-18!241;UBERON:0000369!2.82e-18!4;UBERON:0002435!2.82e-18!4;UBERON:0000204!2.82e-18!4;UBERON:0010082!2.82e-18!4;UBERON:0001871!3.54e-18!7;UBERON:0000483!1.40e-17!309;UBERON:0000119!2.55e-17!312;UBERON:0002298!2.94e-17!8;UBERON:0002680!3.24e-16!9;UBERON:0001895!3.24e-16!9;UBERON:0010092!3.24e-16!9;UBERON:0000064!4.79e-16!219;UBERON:0000477!3.07e-15!286;UBERON:0005383!3.49e-14!3;UBERON:0005382!3.49e-14!3;UBERON:0000475!2.25e-13!365;UBERON:0002021!2.52e-13!5;UBERON:0006331!4.91e-13!3;UBERON:0000988!5.55e-13!3;UBERON:0000200!7.63e-11!6;UBERON:0001873!5.29e-10!2;UBERON:0010122!5.29e-10!2;UBERON:0002148!1.24e-09!2;UBERON:0009662!1.24e-09!2;UBERON:0001875!1.47e-09!2;UBERON:0006514!1.47e-09!2;UBERON:0001876!1.60e-09!2;UBERON:0000062!1.65e-09!511;UBERON:0001954!5.10e-09!2;UBERON:0003022!5.10e-09!2;UBERON:0002421!5.10e-09!2;UBERON:0002600!5.10e-09!2;UBERON:0002360!1.09e-08!2;UBERON:0000094!1.09e-08!2;UBERON:0007645!1.09e-08!2;UBERON:0000481!8.10e-08!347;UBERON:0002037!6.61e-07!6;UBERON:0006215!6.61e-07!6
|ontology_enrichment_uberon_v019=UBERON:0000369;2.29e-88;4!UBERON:0002435;2.29e-88;4!UBERON:0000204;2.29e-88;4!UBERON:0000125;2.08e-87;9!UBERON:0002308;2.08e-87;9!UBERON:0009663;1.83e-78;7!UBERON:0005383;7.01e-67;3!UBERON:0005382;7.01e-67;3!UBERON:0002420;3.73e-61;9!UBERON:0007245;3.73e-61;9!UBERON:0010009;3.73e-61;9!UBERON:0010011;3.73e-61;9!UBERON:0000454;3.73e-61;9!UBERON:0001873;4.47e-45;2!UBERON:0003528;1.79e-29;34!UBERON:0002020;1.79e-29;34!UBERON:0001874;1.07e-23;1!UBERON:0001869;2.01e-23;32!UBERON:0001882;2.34e-23;1!UBERON:0005403;2.34e-23;1!UBERON:0002791;2.70e-23;32!UBERON:0001893;4.47e-21;34!UBERON:0001017;2.86e-15;75!UBERON:0002780;3.55e-15;41!UBERON:0001890;3.55e-15;41!UBERON:0000955;1.63e-13;68!UBERON:0000073;1.36e-12;53!UBERON:0002616;1.36e-12;53!UBERON:0002148;3.06e-12;2!UBERON:0001875;3.06e-12;2!UBERON:0006331;3.06e-12;2!UBERON:0009662;3.06e-12;2!UBERON:0006514;3.06e-12;2!UBERON:0001016;1.60e-11;83!UBERON:0002680;9.01e-11;9!UBERON:0001895;9.01e-11;9!UBERON:0000988;1.35e-08;3!UBERON:0002240;1.35e-08;3!UBERON:0005174;1.35e-08;3!UBERON:0001137;1.35e-08;3!UBERON:0004733;2.60e-08;12!UBERON:0002028;2.60e-08;12!UBERON:0004732;9.68e-08;13!UBERON:0007023;4.96e-07;114
|ontology_enrichment_uberon_v019_2=UBERON:0000369,2.29e-88,4;UBERON:0002435,2.29e-88,4;UBERON:0000204,2.29e-88,4;UBERON:0010082,2.29e-88,4;UBERON:0000125,2.42e-87,9;UBERON:0002308,2.42e-87,9;UBERON:0009663,1.69e-78,7;UBERON:0005383,6.27e-67,3;UBERON:0005382,6.27e-67,3;UBERON:0002420,3.51e-61,9;UBERON:0007245,3.51e-61,9;UBERON:0010009,3.51e-61,9;UBERON:0010011,3.51e-61,9;UBERON:0000454,3.51e-61,9;UBERON:0001873,4.00e-45,2;UBERON:0010122,4.00e-45,2;UBERON:0001049,5.75e-31,56;UBERON:0005068,5.75e-31,56;UBERON:0006241,5.75e-31,56;UBERON:0007135,5.75e-31,56;UBERON:0003528,1.26e-30,34;UBERON:0002020,1.26e-30,34;UBERON:0000073,6.86e-26,53;UBERON:0002616,6.86e-26,53;UBERON:0002791,4.46e-24,32;UBERON:0001869,4.46e-24,32;UBERON:0001874,1.07e-23,1;UBERON:0001882,2.62e-23,1;UBERON:0005403,2.62e-23,1;UBERON:0001893,1.04e-22,34;UBERON:0001017,3.01e-21,81;UBERON:0003075,3.01e-21,82;UBERON:0007284,3.01e-21,82;UBERON:0002346,2.89e-20,86;UBERON:0000955,5.86e-20,68;UBERON:0006238,5.86e-20,68;UBERON:0001016,3.70e-19,89;UBERON:0002780,6.02e-19,41;UBERON:0001890,6.02e-19,41;UBERON:0003080,6.02e-19,41;UBERON:0006240,6.02e-19,41;UBERON:0010371,9.10e-17,104;UBERON:0007023,1.98e-15,114;UBERON:0003076,8.38e-14,15;UBERON:0003057,8.38e-14,15;UBERON:0010314,3.39e-13,132;UBERON:0003056,7.43e-13,61;UBERON:0001875,2.90e-12,2;UBERON:0006514,2.90e-12,2;UBERON:0002148,3.62e-12,2;UBERON:0006331,3.62e-12,2;UBERON:0009662,3.62e-12,2;UBERON:0002680,9.69e-11,9;UBERON:0001895,9.69e-11,9;UBERON:0010092,9.69e-11,9;UBERON:0004121,5.05e-10,171;UBERON:0000924,5.05e-10,171;UBERON:0006601,5.05e-10,171;UBERON:0000025,5.27e-09,192;UBERON:0002240,1.40e-08,3;UBERON:0005174,1.40e-08,3;UBERON:0001137,1.40e-08,3;UBERON:0000988,1.51e-08,3;UBERON:0004733,2.75e-08,12;UBERON:0002028,2.75e-08,12;UBERON:0007277,2.75e-08,12;UBERON:0004732,1.02e-07,13;UBERON:0011216,1.33e-07,223;UBERON:0004111,3.89e-07,240
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,2.65722415744152,6.51220768577203,3.05163472634166,0.331737779793674,0.886642856860642,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0.802577647298789,0.468528891450678,0,0,0,0,0,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.823040347426423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.789744236554321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0342636508924,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.250381861413,0,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24802287837608,0,0.478901577171454,0.41023272848151,0.504143392443436,0.622415272177961,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,1.56215619722769,0.206686796501184,0.570742291745161,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.263091094251396,0,0,0,8.0128950857161,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17785080268967,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.543931921527318,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724030971033267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,2.65722415744152,6.51220768577203,3.05163472634166,0.331737779793674,0.886642856860642,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0.802577647298789,0.468528891450678,0,0,0,0,0,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.823040347426423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.789744236554321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0342636508924,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.250381861413,0,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24802287837608,0,0.478901577171454,0.41023272848151,0.504143392443436,0.622415272177961,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,1.56215619722769,0.206686796501184,0.570742291745161,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.263091094251396,0,0,0,8.0128950857161,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17785080268967,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.543931921527318,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724030971033267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p@chr14:78638636..78638661,+
}}
}}

Latest revision as of 23:07, 24 July 2015

Short description:p@chr14:78638636..78638661, +
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr14:78638636..78638661, +
Coexpression cluster:C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0
2
4
6
8
10




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Hg19::chr14:78638636..78638661,%2B&oldid=3373853"