FFCP PHASE1:Hg19::chrX:2712069..2712080,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7499 | |EntrezGene=7499 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12806 | |HGNC=12806 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-495bp_to_ENST00000519244_5end | |association_with_transcript=-495bp_to_ENST00000519244_5end | ||
|cluster_id=chrX:2712069..2712080,+ | |||
|coexpression_cluster_id=C145 | |||
|description=CAGE_peak_6_at_XG_5end | |description=CAGE_peak_6_at_XG_5end | ||
|id=chrX:2712069..2712080,+ | |id=chrX:2712069..2712080,+ | ||
|ontology_enrichment_celltype=CL:0002322!6.59e-26!5;CL:0000039!4.64e-19!7;CL:0000586!4.64e-19!7 | |ontology_enrichment_celltype=CL:0002322!6.59e-26!5;CL:0000039!4.64e-19!7;CL:0000586!4.64e-19!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.02e-23;7!CL:0000586;2.02e-23;7!CL:0000333;2.53e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.02e-23,7;CL:0000586,2.02e-23,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;9.54e-17;10!UBERON:0005564;9.54e-17;10 | |||
|ontology_enrichment_disease=DOID:3095!2.81e-23!22;DOID:2994!2.81e-23!22;DOID:171!1.19e-13!10;DOID:169!1.30e-10!6;DOID:3193!1.73e-08!2;DOID:962!1.73e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.73e-29;22!DOID:2994;2.73e-29;22!DOID:171;6.39e-17;10!DOID:169;5.54e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.73e-29,22;DOID:2994,2.73e-29,22;DOID:171,6.39e-17,10;DOID:169,5.54e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000473!9.19e-17!8;UBERON:0000013!1.50e-12!5;UBERON:0002410!1.50e-12!5;UBERON:0003135!2.30e-12!11;UBERON:0003714!1.73e-08!2;UBERON:0000010!2.29e-07!8;UBERON:0000991!9.87e-07!21;UBERON:0009196!9.87e-07!21;UBERON:0009117!9.87e-07!21;UBERON:0005564!9.87e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.21e-20;8!UBERON:0003135;2.51e-15;11!UBERON:0002346;3.10e-11;4!UBERON:0000923;3.10e-11;4!UBERON:0010316;3.10e-11;4!UBERON:0005291;3.10e-11;4!UBERON:0000013;2.53e-09;5!UBERON:0002410;2.53e-09;5!UBERON:0002050;2.97e-09;5!UBERON:0005423;2.97e-09;5!UBERON:0000991;1.59e-08;21!UBERON:0003101;3.51e-08;22!UBERON:0000079;3.51e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.21e-20,8;UBERON:0003135,2.51e-15,11;UBERON:0000013,2.53e-09,5;UBERON:0002410,2.53e-09,5;UBERON:0000991,1.59e-08,21;UBERON:0009196,1.59e-08,21;UBERON:0009117,1.59e-08,21;UBERON:0005564,1.59e-08,21;UBERON:0004176,3.51e-08,22;UBERON:0003101,3.51e-08,22;UBERON:0000079,3.51e-08,22 | |||
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|short_description=p6@XG | |short_description=p6@XG | ||
}} | }} |
Latest revision as of 19:22, 24 September 2015
Short description: | p6@XG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_XG_5end |
Coexpression cluster: | C145_neuroblastoma_peripheral_neuroectodermal_neuroepithelioma_carcinoid_adult_extraskeletal |
Association with transcript: | -495bp_to_ENST00000519244_5end |
EntrezGene: | XG |
HGNC: | 12806 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.02e-23 | 7 |
germ cell | 2.02e-23 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 1.21e-20 | 8 |
male reproductive organ | 2.51e-15 | 11 |
sympathetic nervous system | 2.53e-09 | 5 |
autonomic nervous system | 2.53e-09 | 5 |
gonad | 1.59e-08 | 21 |
indifferent external genitalia | 1.59e-08 | 21 |
indifferent gonad | 1.59e-08 | 21 |
gonad primordium | 1.59e-08 | 21 |
external genitalia | 3.51e-08 | 22 |
male organism | 3.51e-08 | 22 |
male reproductive system | 3.51e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.73e-29 | 22 |
germ cell cancer | 2.73e-29 | 22 |
neuroectodermal tumor | 6.39e-17 | 10 |
neuroendocrine tumor | 5.54e-08 | 6 |