FFCP PHASE1:Hg19::chr3:87027850..87027867,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:87027850..87027867,- | |||
|description=CAGE_peak_at_chr3:87027850..87027867,- | |description=CAGE_peak_at_chr3:87027850..87027867,- | ||
|id=chr3:87027850..87027867,- | |id=chr3:87027850..87027867,- | ||
|ontology_enrichment_celltype=CL:0000057!2.89e-11!75;CL:0000055!2.77e-08!180;CL:0002334!8.33e-08!12;CL:0002620!4.99e-07!23 | |ontology_enrichment_celltype=CL:0000057!2.89e-11!75;CL:0000055!2.77e-08!180;CL:0002334!8.33e-08!12;CL:0002620!4.99e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.08e-09;3!CL:0002537;1.43e-09;5!CL:0000349;1.31e-08;19!CL:0002334;4.23e-08;12!CL:0002561;1.71e-07;2!CL:0002617;4.15e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.09e-10,3;CL:0002537,7.63e-10,5;CL:0000057,4.52e-09,76;CL:0000349,5.79e-09,19;CL:0002334,4.57e-08,12;CL:0002561,1.67e-07,2;CL:0002617,2.91e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!4.83e-12!14;UBERON:0000158!4.83e-12!14;UBERON:0004923!6.86e-11!57;UBERON:0000478!8.98e-10!24;UBERON:0003102!2.24e-07!95;UBERON:0003124!2.71e-07!7;UBERON:0004871!3.20e-07!8 | |ontology_enrichment_uberon=UBERON:0005631!4.83e-12!14;UBERON:0000158!4.83e-12!14;UBERON:0004923!6.86e-11!57;UBERON:0000478!8.98e-10!24;UBERON:0003102!2.24e-07!95;UBERON:0003124!2.71e-07!7;UBERON:0004871!3.20e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.26e-13;10!UBERON:0000158;1.26e-13;10!UBERON:0004457;6.12e-12;9!UBERON:0000042;6.12e-12;9!UBERON:0000478;2.63e-10;24!UBERON:0003124;1.08e-09;3!UBERON:0000920;1.08e-09;3!UBERON:0003688;1.18e-08;6!UBERON:0002358;1.18e-08;6!UBERON:0003684;1.18e-08;6!UBERON:0001178;1.18e-08;6!UBERON:0005933;1.71e-07;2!UBERON:0005942;1.71e-07;2!UBERON:0005932;1.71e-07;2!UBERON:0004923;4.69e-07;55!UBERON:0000305;7.79e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.29e-16,14;UBERON:0000158,4.29e-16,14;UBERON:0004923,1.03e-14,66;UBERON:0003124,5.94e-11,7;UBERON:0000478,9.23e-11,24;UBERON:0000920,4.09e-10,3;UBERON:0004871,3.62e-09,8;UBERON:0004457,1.15e-08,12;UBERON:0000042,1.15e-08,12;UBERON:0003688,1.44e-08,6;UBERON:0002358,1.44e-08,6;UBERON:0003684,1.44e-08,6;UBERON:0001178,1.44e-08,6;UBERON:0005933,1.67e-07,2;UBERON:0005942,1.67e-07,2;UBERON:0005932,1.67e-07,2;UBERON:0000305,5.03e-07,7 | |||
|phase1_expression=1.63510541343501,3.63970890614671,0.563817616383885,4.00293193412522,3.12872766099101,0,0,0,0.522371256399677,0.245733936501509,0.697801167972428,0.218441372130172,0.527533956456907,0.37129905888014,0.662794751455832,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0.869079113764942,0,0.486634870302636,0.378139268656271,0.443458794925128,0.351339142772504,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,1.72852777344,0,0.312160076830321,0,1.04614076386261,0.23486899728753,0.161872944368132,0.421352420106746,0.408308342509787,0.245668634623536,0.619954687054593,1.18800285728205,2.96720315134268,0,0,0.505008341862199,0.500474079487857,0,0,4.90380473278431,0.751190294532984,0.113432183160021,0.717558542755448,1.06778694409284,1.69545520927649,0,1.44273540933814,0.257640540045629,0.37223371266318,0.168776332241266,0.487185025805993,0,2.02509777013059,0.161646056818812,0,0.503760491138201,0.169560592310488,0.386521706326594,0,0,0,0,0.116193942869518,0,0,0.36497735907583,0,3.21620469096443,0,3.25057549622385,2.88751792667834,0.354920400119532,0,0.241011029883482,0.55146986366197,0,0.237270619111097,0.269662616320329,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,1.44331342025273,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.22001485746285,0.258543431515556,3.57656445851882,0.845302752556,1.32969058292435,2.08014873822732,0,0,0,0.57191197463259,0,0,0.977208552881205,1.42156779497018,0,0.301439377059586,0,0.399891964728228,0,0,0,0.479249710983165,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,0.36807447515742,1.00034104211935,0.271265023699736,1.45579603071565,3.92543775353756,1.41932173530541,0.937131319941706,0.300946099727719,0,1.03473071292505,0.664225598535437,0.184369168541703,1.82455590382974,0,0,0,0,0,0.606255142892519,1.66435439510497,0.604780586659361,1.24053903909388,0,1.68396056659844,1.15325234330131,2.55853624533352,0.804269605718038,1.48418066444991,0.616838775210622,1.06537035187876,0.246381468041427,0.519254429183621,0.232420756919918,0,0,0,0,0.182091168006717,0.262248829918848,0,0.15403067420883,0,0,0,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0.328014645699706,0,0.824328093181778,0,0,0,0,1.6068392984416,0.193341436584244,1.07834031980251,0.767518373630648,0.827019434907183,0.751941714077915,1.0151168573996,0.170453254832202,0.267096106940212,0,0.384380134730212,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0.632758849437452,1.71567174531442,0,0,0,0,0.719489830333259,1.09814811894422,0.353437207037059,0,0,0,0.48763373908959,0,0,0.136499911407986,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,1.26664581178598,2.30506425071931,0,0,0,0,0,1.12972560932135,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,1.67121139316383,0.593929361665277,1.84296421259539,0,0,0.222617410045812,0,0,0.19924798825107,0,0,0,0,3.73247505194169,0,0.179021174675609,0,0.197286811273867,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0,4.01859059005492,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.91153644677601,0.23056390438806,0,0.217294743844016,1.91400695839152,1.64875668123352,12.7928346244472,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.34945333648406,0,0.387025325156341,0.219267951258557,0.821154570532092,0,0.0882561266915003,0,0,0.397429223405979,0,0.391102765469606,0.0801588202515337,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0.717873024576814,0,0,0,0.0671834724867263,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0.157204305099666,0,0.496166021811951,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0.122026264901963,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.597019211547496,0,0.554805861502613,0.189403005275089,1.25783950876288,0.889811221596536,0,0.907385542579434,0,0,0.318593534327405,0.449803112163605,0,0.414706207840855,0,0,0.150257608997218,1.14241563650639,0.406870733204662,0.181848659202559,0.107410557042488,0,0.796191777397232,1.60011105865261,0.686791410365586,0.673498977531838,0,0,0.428883182749851,0.260994291965212,0.226705925512272,0,0.489473409012935,0.358177682162975,0,0.438568099157414,0.176689145945881,0.38582807654183,0,0,0,0.303859956177382,0,0,0,0,0,0.245772908753719,0,0,0,0,1.13503190713367,0,0.1398795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| ||
|short_description=p@chr3:87027850..87027867,- | |short_description=p@chr3:87027850..87027867,- | ||
}} | }} |
Latest revision as of 23:47, 29 July 2015
Short description: | p@chr3:87027850..87027867, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:87027850..87027867, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.09e-10 | 3 |
amnion mesenchymal stem cell | 7.63e-10 | 5 |
fibroblast | 4.52e-09 | 76 |
extraembryonic cell | 5.79e-09 | 19 |
preadipocyte | 4.57e-08 | 12 |
outer root sheath cell | 1.67e-07 | 2 |
adipocyte of breast | 2.91e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.29e-16 | 14 |
membranous layer | 4.29e-16 | 14 |
organ component layer | 1.03e-14 | 66 |
chorion | 5.94e-11 | 7 |
extraembryonic structure | 9.23e-11 | 24 |
egg chorion | 4.09e-10 | 3 |
somatic layer of lateral plate mesoderm | 3.62e-09 | 8 |
cavity lining | 1.15e-08 | 12 |
serous membrane | 1.15e-08 | 12 |
omentum | 1.44e-08 | 6 |
peritoneum | 1.44e-08 | 6 |
abdominal cavity | 1.44e-08 | 6 |
visceral peritoneum | 1.44e-08 | 6 |
hair root sheath | 1.67e-07 | 2 |
hair outer root sheath | 1.67e-07 | 2 |
bulb of hair follicle | 1.67e-07 | 2 |
amnion | 5.03e-07 | 7 |