FFCP PHASE1:Hg19::chr15:39888677..39888682,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:39888677..39888682,+
|short_description=p@chr15:39888677..39888682,+
|description=CAGE_peak_at_chr15:39888677..39888682,+
|association_with_transcript=NA
...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:39888677..39888682,+ | |||
|description=CAGE_peak_at_chr15:39888677..39888682,+ | |||
|id=chr15:39888677..39888682,+ | |||
|ontology_enrichment_celltype=CL:0002371!2.05e-15!591;CL:0000144!9.38e-14!625;CL:0000055!8.90e-13!180;CL:0000057!1.09e-12!75;CL:0000548!3.17e-11!679;CL:0000004!3.17e-11!679;CL:0000255!3.17e-11!679;CL:0000012!6.84e-11!682;CL:0000222!1.09e-08!119;CL:0000220!6.48e-08!246;CL:0002321!1.15e-07!248;CL:0000115!1.40e-07!35;CL:0000192!1.61e-07!42;CL:0000514!1.61e-07!42;CL:0000003!8.06e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0002580;1.42e-11;3!CL:0000197;2.27e-09;6!CL:0000098;2.27e-09;6!CL:0002167;2.27e-09;6!CL:0002138;7.46e-09;6!CL:0000244;1.10e-08;4!CL:0000731;1.10e-08;4!CL:0002539;7.33e-08;10!CL:0002334;2.85e-07;12!CL:0002262;2.87e-07;2!CL:0002536;2.87e-07;2!CL:1000398;2.87e-07;2!CL:0002617;2.87e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,1.23e-11,3;CL:0000197,1.77e-09,6;CL:0000098,1.77e-09,6;CL:0002167,1.77e-09,6;CL:0000244,9.80e-09,4;CL:0000731,9.80e-09,4;CL:0005020,1.01e-08,6;CL:0002138,1.01e-08,6;CL:0005022,1.01e-08,6;CL:0002539,6.60e-08,10;CL:0002617,1.67e-07,2;CL:0002536,2.71e-07,2;CL:0002262,2.80e-07,2;CL:1000398,2.80e-07,2;CL:0002334,2.91e-07,12;CL:0000115,6.15e-07,36 | |||
|ontology_enrichment_development_v019=CL:0005022;7.46e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.02e-15!79;UBERON:0007798!2.02e-15!79;UBERON:0000055!3.28e-14!69;UBERON:0001981!6.01e-12!60;UBERON:0007500!6.01e-12!60;UBERON:0004537!6.01e-12!60;UBERON:0006965!6.01e-12!60;UBERON:0004535!7.25e-12!110;UBERON:0001009!1.34e-11!113;UBERON:0004872!3.05e-11!84;UBERON:0003914!6.30e-10!118;UBERON:0000468!2.37e-08!659;UBERON:0001637!3.67e-08!42;UBERON:0003509!3.67e-08!42;UBERON:0004572!3.67e-08!42;UBERON:0000467!6.53e-08!625;UBERON:0000480!8.12e-08!626;UBERON:0000490!7.85e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;2.27e-08;10!UBERON:0004237;7.33e-08;10!UBERON:0004695;7.33e-08;10!UBERON:0002111;7.33e-08;10!UBERON:0004178;7.33e-08;10!UBERON:0000305;1.18e-07;7!UBERON:0001443;1.42e-07;11!UBERON:0001281;2.87e-07;2!UBERON:0003497;2.87e-07;2!UBERON:0003909;2.87e-07;2!UBERON:0003835;2.87e-07;2!UBERON:0000365;5.20e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004871,5.95e-10,8;UBERON:0000310,1.63e-08,10;UBERON:0000055,3.28e-08,68;UBERON:0004237,6.60e-08,10;UBERON:0004695,6.60e-08,10;UBERON:0002111,6.60e-08,10;UBERON:0004178,6.60e-08,10;UBERON:0001443,1.06e-07,11;UBERON:0000305,1.40e-07,7;UBERON:0001281,2.80e-07,2;UBERON:0003497,2.80e-07,2;UBERON:0003909,2.80e-07,2;UBERON:0003835,2.80e-07,2;UBERON:0000365,4.75e-07,5 | |||
|phase1_expression=1.63510541343501,1.71280419112787,0.986680828671798,0,0.893922188854576,0.872338524100369,0,0,0.261185628199839,0.245733936501509,0.697801167972428,1.09220686065086,1.84636884759917,0.123766352960047,0,2.01697543935533,1.80808358407193,1.46062018077475,1.46379839637152,0.246242116153576,0.204000691244253,0.626909442956176,0,0,0.125542639594803,0,0,0,0.393364276848904,0.767658796194425,0.154816123316076,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0.553995408531877,0.601633342410425,0.217010870715852,0,0,0,0,0,0,1.16214518452842,0.411167888021826,0.309706370895104,0.28769239232215,0,0,0.344745680736619,0,0,0.376484679085209,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0.75374599577023,1.0429658368404,0,1.21079900526674,0.368277635987565,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0.50133791063589,0.144846518960824,0,0,0,0.221729397462564,0.087834785693126,0,1.09288586487763,0,0,0,0,0,0,0,0.596287222100115,0,0.347140501607594,0,0,0,0.417989933073621,1.03366703667732,0.35576626268671,1.33888245105868,0.805658634218294,0,1.22031028774085,0.367663080345869,0.81014194788176,1.51809538082936,0,0.112611480483322,0,0,0.916008719652036,0,0,0.872188104285069,2.48485975847659,0.506522046658319,0.397227542439656,0.860509862246441,0.354668382198357,0,1.06748995729705,0.49333509683432,0.622422070799533,0.538842688278752,0.653847612453835,0.302714855289863,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0.245668634623536,0,1.18800285728205,0.989067717114227,0,0,0,0,0.554128230968366,0,0.919463387397059,0.600952235626387,0.453728732640084,1.97328599257748,0.85422955527427,0.847727604638247,0,0.412210116953756,1.8034837803194,0.744467425326359,0.675105328965065,0.68205903612839,1.00973509697646,0.460249493211497,0.161646056818812,1.77504796258307,0.705264687593482,0.339121184620975,0.773043412653187,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,1.92972281457866,0,2.3218396401599,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,1.4763109092493,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0.658501712451753,0,0.201057944823262,0.370353780634118,0,0,0,0,0.117408694235822,0.577465791044295,2.31492756288305,1.71228737011138,0,0,0,0,0,0,0.503946384596579,0.708875486211932,0.806026704325635,0.290633938513962,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0.514414748524284,1.41849132023278,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,2.07970861530807,2.14114786556594,2.52323864054295,1.7571212248907,0.902838299183157,0,0,0,0.553107505625109,0.260650843404249,0,0,0,0.215714200818617,0.213455115606889,0,0,0,2.48107807818777,4.29693525206575,3.64858122762996,0.512556597022804,2.04682899626681,3.05622450172854,0,0,0.532685175939381,0,0,0,0,0.200506470303285,0,0.229628896329213,0.182091168006717,0,0,0,0,0,0,0,2.04112446331819,0.431831832204279,1.54227252690289,0.270946437543853,0,0,0,0,0,0.261435451024901,0,0.328014645699706,0,0,0,0,0.574265537996172,0,1.6068392984416,0,0,0,0.275673144969061,0,0,0,0.0890320356467374,0.330569830721956,0.384380134730212,0.255225424989168,0,0,1.25924938732256,0,0,0.532306030317022,0,0.18532421910392,0,0,0.316379424718726,0.190630193923825,0.767693373934002,0,0,0,0.539617372749944,0.274537029736055,0.117812402345686,0.404364963146632,0,0.842516912477962,0,0,0,0,0.141405431953713,0,0.551365343546124,0.66343897524122,1.31535265576129,1.73632660280006,0,1.82619339266434,0.92947049429925,0.563391205064483,0.286822704408103,0.294747123039363,1.78335525740625,0,0,0,0,0.699869440489966,0.288666338176536,0,0,0.282431402330337,2.58303223602738,6.73885902670502,2.21715076768338,0.918893600827838,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,1.19372242368845,0,3.07160702099232,0,0,0,0,0,0,0,0,0.102268682502155,0,0.933118762985422,0.179736702294654,0,0,0.0986434056369336,0,3.33410970433911,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0.227884111694002,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0.561111741760736,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0.429765441419957,0,0.837847203816763,0,0.717873024576814,0.199679000498991,0,0,0,1.44119953416961,0,0.0787831823072236,0,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,1.02232813071253,0,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,1.08803560673895,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0.295710299979268,0,0,0.310525913752519,0,0.53168342911599,0.521745061811734,0,0,0,0.545545977607678,0,0,1.19428766609585,0,0.343395705182793,0,0,0,0,0,0.453411851024545,0.694567422971502,0,0,0,0,0,0,0,0.512483037175893,0,0,0,0,0,0,0,0.491545817507439,0.211312123358627,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,1.41070377476274,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0.327543835020193,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0.207216164163037,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.39854229375634,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,1.85997509083376,0.462175628631418,1.29787968637137,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,1.9307228228694,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=1.63510541343501,1.71280419112787,0.986680828671798,0,0.893922188854576,0.872338524100369,0,0,0.261185628199839,0.245733936501509,0.697801167972428,1.09220686065086,1.84636884759917,0.123766352960047,0,2.01697543935533,1.80808358407193,1.46062018077475,1.46379839637152,0.246242116153576,0.204000691244253,0.626909442956176,0,0,0.125542639594803,0,0,0,0.393364276848904,0.767658796194425,0.154816123316076,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0.553995408531877,0.601633342410425,0.217010870715852,0,0,0,0,0,0,1.16214518452842,0.411167888021826,0.309706370895104,0.28769239232215,0,0,0.344745680736619,0,0,0.376484679085209,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0.75374599577023,1.0429658368404,0,1.21079900526674,0.368277635987565,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0.50133791063589,0.144846518960824,0,0,0,0.221729397462564,0.087834785693126,0,1.09288586487763,0,0,0,0,0,0,0,0.596287222100115,0,0.347140501607594,0,0,0,0.417989933073621,1.03366703667732,0.35576626268671,1.33888245105868,0.805658634218294,0,1.22031028774085,0.367663080345869,0.81014194788176,1.51809538082936,0,0.112611480483322,0,0,0.916008719652036,0,0,0.872188104285069,2.48485975847659,0.506522046658319,0.397227542439656,0.860509862246441,0.354668382198357,0,1.06748995729705,0.49333509683432,0.622422070799533,0.538842688278752,0.653847612453835,0.302714855289863,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0.245668634623536,0,1.18800285728205,0.989067717114227,0,0,0,0,0.554128230968366,0,0.919463387397059,0.600952235626387,0.453728732640084,1.97328599257748,0.85422955527427,0.847727604638247,0,0.412210116953756,1.8034837803194,0.744467425326359,0.675105328965065,0.68205903612839,1.00973509697646,0.460249493211497,0.161646056818812,1.77504796258307,0.705264687593482,0.339121184620975,0.773043412653187,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,1.92972281457866,0,2.3218396401599,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,1.4763109092493,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0.658501712451753,0,0.201057944823262,0.370353780634118,0,0,0,0,0.117408694235822,0.577465791044295,2.31492756288305,1.71228737011138,0,0,0,0,0,0,0.503946384596579,0.708875486211932,0.806026704325635,0.290633938513962,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0.514414748524284,1.41849132023278,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,2.07970861530807,2.14114786556594,2.52323864054295,1.7571212248907,0.902838299183157,0,0,0,0.553107505625109,0.260650843404249,0,0,0,0.215714200818617,0.213455115606889,0,0,0,2.48107807818777,4.29693525206575,3.64858122762996,0.512556597022804,2.04682899626681,3.05622450172854,0,0,0.532685175939381,0,0,0,0,0.200506470303285,0,0.229628896329213,0.182091168006717,0,0,0,0,0,0,0,2.04112446331819,0.431831832204279,1.54227252690289,0.270946437543853,0,0,0,0,0,0.261435451024901,0,0.328014645699706,0,0,0,0,0.574265537996172,0,1.6068392984416,0,0,0,0.275673144969061,0,0,0,0.0890320356467374,0.330569830721956,0.384380134730212,0.255225424989168,0,0,1.25924938732256,0,0,0.532306030317022,0,0.18532421910392,0,0,0.316379424718726,0.190630193923825,0.767693373934002,0,0,0,0.539617372749944,0.274537029736055,0.117812402345686,0.404364963146632,0,0.842516912477962,0,0,0,0,0.141405431953713,0,0.551365343546124,0.66343897524122,1.31535265576129,1.73632660280006,0,1.82619339266434,0.92947049429925,0.563391205064483,0.286822704408103,0.294747123039363,1.78335525740625,0,0,0,0,0.699869440489966,0.288666338176536,0,0,0.282431402330337,2.58303223602738,6.73885902670502,2.21715076768338,0.918893600827838,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,1.19372242368845,0,3.07160702099232,0,0,0,0,0,0,0,0,0.102268682502155,0,0.933118762985422,0.179736702294654,0,0,0.0986434056369336,0,3.33410970433911,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0.227884111694002,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0.561111741760736,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0.429765441419957,0,0.837847203816763,0,0.717873024576814,0.199679000498991,0,0,0,1.44119953416961,0,0.0787831823072236,0,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,1.02232813071253,0,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,1.08803560673895,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0.295710299979268,0,0,0.310525913752519,0,0.53168342911599,0.521745061811734,0,0,0,0.545545977607678,0,0,1.19428766609585,0,0.343395705182793,0,0,0,0,0,0.453411851024545,0.694567422971502,0,0,0,0,0,0,0,0.512483037175893,0,0,0,0,0,0,0,0.491545817507439,0.211312123358627,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,1.41070377476274,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0.327543835020193,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0.207216164163037,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.39854229375634,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,1.85997509083376,0.462175628631418,1.29787968637137,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,1.9307228228694,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr15:39888677..39888682,+ | |||
}} | }} |
Latest revision as of 01:22, 25 July 2015
Short description: | p@chr15:39888677..39888682, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39888677..39888682, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 1.23e-11 | 3 |
receptor cell | 1.77e-09 | 6 |
sensory epithelial cell | 1.77e-09 | 6 |
olfactory epithelial cell | 1.77e-09 | 6 |
transitional epithelial cell | 9.80e-09 | 4 |
urothelial cell | 9.80e-09 | 4 |
lymphangioblast | 1.01e-08 | 6 |
endothelial cell of lymphatic vessel | 1.01e-08 | 6 |
vascular lymphangioblast | 1.01e-08 | 6 |
aortic smooth muscle cell | 6.60e-08 | 10 |
adipocyte of breast | 1.67e-07 | 2 |
amniotic epithelial cell | 2.71e-07 | 2 |
endothelial cell of sinusoid | 2.80e-07 | 2 |
endothelial cell of hepatic sinusoid | 2.80e-07 | 2 |
preadipocyte | 2.91e-07 | 12 |
endothelial cell | 6.15e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
somatic layer of lateral plate mesoderm | 5.95e-10 | 8 |
breast | 1.63e-08 | 10 |
vessel | 3.28e-08 | 68 |
blood vessel smooth muscle | 6.60e-08 | 10 |
arterial system smooth muscle | 6.60e-08 | 10 |
artery smooth muscle tissue | 6.60e-08 | 10 |
aorta smooth muscle tissue | 6.60e-08 | 10 |
chest | 1.06e-07 | 11 |
amnion | 1.40e-07 | 7 |
hepatic sinusoid | 2.80e-07 | 2 |
abdomen blood vessel | 2.80e-07 | 2 |
sinusoid | 2.80e-07 | 2 |
abdominal segment blood vessel | 2.80e-07 | 2 |
urothelium | 4.75e-07 | 5 |