FFCP PHASE1:Hg19::chr4:74486249..74486273,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=166824 | |EntrezGene=166824 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20796 | |HGNC=20796 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000307439_5end | |association_with_transcript=0bp_to_ENST00000307439_5end | ||
|cluster_id=chr4:74486249..74486273,- | |||
|coexpression_cluster_id=C1523 | |||
|description=CAGE_peak_4_at_RASSF6_5end | |description=CAGE_peak_4_at_RASSF6_5end | ||
|id=chr4:74486249..74486273,- | |id=chr4:74486249..74486273,- | ||
|ontology_enrichment_celltype=CL:0000945!4.88e-11!24;CL:0000826!4.88e-11!24;CL:0000066!1.11e-10!254;CL:0002076!1.33e-09!43;CL:0000223!1.12e-07!59 | |ontology_enrichment_celltype=CL:0000945!4.88e-11!24;CL:0000826!4.88e-11!24;CL:0000066!1.11e-10!254;CL:0002076!1.33e-09!43;CL:0000223!1.12e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.15e-11;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.76e-11,24;CL:0000826,1.76e-11,24;CL:0002076,5.73e-08,42;CL:0000223,3.11e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0006595;7.60e-07;86 | |||
|ontology_enrichment_disease=DOID:305!9.25e-10!106;DOID:1749!3.58e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.57e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.63e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.26e-16!169;UBERON:0000925!1.26e-16!169;UBERON:0006595!1.26e-16!169;UBERON:0001007!2.25e-13!155;UBERON:0001555!2.25e-13!155;UBERON:0007026!2.25e-13!155;UBERON:0004921!5.71e-11!129;UBERON:0004185!5.71e-11!129;UBERON:0000077!4.10e-08!130;UBERON:0000161!6.96e-08!35;UBERON:0001004!7.39e-08!72;UBERON:0005911!4.58e-07!82;UBERON:0005409!8.75e-07!35 | |ontology_enrichment_uberon=UBERON:0004119!1.26e-16!169;UBERON:0000925!1.26e-16!169;UBERON:0006595!1.26e-16!169;UBERON:0001007!2.25e-13!155;UBERON:0001555!2.25e-13!155;UBERON:0007026!2.25e-13!155;UBERON:0004921!5.71e-11!129;UBERON:0004185!5.71e-11!129;UBERON:0000077!4.10e-08!130;UBERON:0000161!6.96e-08!35;UBERON:0001004!7.39e-08!72;UBERON:0005911!4.58e-07!82;UBERON:0005409!8.75e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.64e-09;22!UBERON:0004921;1.67e-09;33!UBERON:0000160;1.16e-07;17!UBERON:0006562;2.55e-07;2!UBERON:0002370;4.14e-07;2!UBERON:0003127;4.14e-07;2!UBERON:0005058;4.14e-07;2!UBERON:0009113;4.14e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.67e-14,160;UBERON:0000925,1.67e-14,160;UBERON:0006595,1.67e-14,160;UBERON:0001007,2.51e-12,145;UBERON:0001555,2.51e-12,145;UBERON:0007026,2.51e-12,145;UBERON:0004921,7.38e-12,118;UBERON:0005409,4.11e-10,25;UBERON:0001004,7.01e-09,74;UBERON:0000160,1.53e-07,17;UBERON:0003127,2.68e-07,2;UBERON:0001041,5.21e-07,87 | |||
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| ||
|short_description=p4@RASSF6 | |short_description=p4@RASSF6 | ||
}} | }} |
Latest revision as of 13:42, 18 September 2015
Short description: | p4@RASSF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RASSF6_5end |
Coexpression cluster: | C1523_diffuse_small_lymphoma_thymus_Burkitt_lymphangiectasia_b |
Association with transcript: | 0bp_to_ENST00000307439_5end |
EntrezGene: | RASSF6 |
HGNC: | 20796 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.76e-11 | 24 |
pro-B cell | 1.76e-11 | 24 |
endo-epithelial cell | 5.73e-08 | 42 |
endodermal cell | 3.11e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.67e-14 | 160 |
endoderm | 1.67e-14 | 160 |
presumptive endoderm | 1.67e-14 | 160 |
digestive system | 2.51e-12 | 145 |
digestive tract | 2.51e-12 | 145 |
primitive gut | 2.51e-12 | 145 |
subdivision of digestive tract | 7.38e-12 | 118 |
gastrointestinal system | 4.11e-10 | 25 |
respiratory system | 7.01e-09 | 74 |
intestine | 1.53e-07 | 17 |
open tracheal system trachea | 2.68e-07 | 2 |
foregut | 5.21e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.63e-08 | 10 |