FFCP PHASE1:Hg19::chr5:111857189..111857217,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000541361_5end | |association_with_transcript=0bp_to_ENST00000541361_5end | ||
|cluster_id=chr5:111857189..111857217,+ | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_1_at_ENST00000541361_5end | |description=CAGE_peak_1_at_ENST00000541361_5end | ||
|id=chr5:111857189..111857217,+ | |id=chr5:111857189..111857217,+ | ||
|ontology_enrichment_celltype=CL:0000945!1.67e-63!24;CL:0000826!1.67e-63!24;CL:0000236!1.57e-43!14;CL:0000542!2.78e-28!53;CL:0000051!2.78e-28!53;CL:0000838!3.01e-26!52;CL:0002087!2.16e-10!119;CL:0000738!6.40e-09!140;CL:0000785!1.80e-08!2;CL:0000955!1.80e-08!2;CL:0000818!1.80e-08!2;CL:0000954!1.80e-08!2;CL:0000816!1.80e-08!2;CL:0002031!7.48e-08!124 | |ontology_enrichment_celltype=CL:0000945!1.67e-63!24;CL:0000826!1.67e-63!24;CL:0000236!1.57e-43!14;CL:0000542!2.78e-28!53;CL:0000051!2.78e-28!53;CL:0000838!3.01e-26!52;CL:0002087!2.16e-10!119;CL:0000738!6.40e-09!140;CL:0000785!1.80e-08!2;CL:0000955!1.80e-08!2;CL:0000818!1.80e-08!2;CL:0000954!1.80e-08!2;CL:0000816!1.80e-08!2;CL:0002031!7.48e-08!124 | ||
|ontology_enrichment_celltype_v019=CL:0000236;7.29e-95;13!CL:0000945;2.40e-90;24!CL:0000542;3.78e-30;53!CL:0000785;6.33e-10;1!CL:0000819;6.33e-10;1!CL:0000946;8.61e-10;1!CL:0000786;8.61e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,4.61e-103,14;CL:0000945,2.20e-90,24;CL:0000826,2.20e-90,24;CL:0000838,2.32e-40,52;CL:0000542,1.50e-39,53;CL:0000051,1.50e-39,53;CL:0000785,4.89e-18,2;CL:0000955,4.89e-18,2;CL:0000818,4.89e-18,2;CL:0000954,4.89e-18,2;CL:0000816,4.89e-18,2;CL:0002087,1.29e-16,115;CL:0002031,8.11e-16,120;CL:0000738,1.20e-13,136;CL:0000817,2.38e-12,3;CL:0002032,4.10e-11,161;CL:0000837,4.10e-11,161;CL:0000037,1.54e-10,168;CL:0000819,6.33e-10,1;CL:0000988,7.28e-10,177;CL:0000946,7.55e-10,1;CL:0000786,7.55e-10,1;CL:0000980,7.55e-10,1 | |||
|ontology_enrichment_development_v019=CL:0000051;3.78e-30;53!CL:0000954;5.57e-18;2!UBERON:0001045;4.85e-10;1 | |||
|ontology_enrichment_disease=DOID:0060058!7.28e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:0060073;6.33e-10;1!DOID:8675;6.33e-10;1!DOID:0060058;1.81e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,6.33e-10,1;DOID:8675,6.33e-10,1;DOID:0060058,1.86e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.18e-16!115;UBERON:0004177!1.07e-11!7;UBERON:0002106!8.57e-11!3;UBERON:0004854!8.57e-11!3;UBERON:0009034!8.57e-11!3;UBERON:0002095!8.57e-11!3;UBERON:0004782!8.57e-11!3;UBERON:0003281!8.57e-11!3;UBERON:0009664!8.57e-11!3;UBERON:0002296!8.57e-11!3;UBERON:0005602!8.57e-11!3;UBERON:0001179!8.57e-11!3;UBERON:0006293!8.57e-11!3;UBERON:0000178!1.02e-10!15;UBERON:0000179!1.02e-10!15;UBERON:0000463!1.02e-10!15 | |ontology_enrichment_uberon=UBERON:0007023!2.18e-16!115;UBERON:0004177!1.07e-11!7;UBERON:0002106!8.57e-11!3;UBERON:0004854!8.57e-11!3;UBERON:0009034!8.57e-11!3;UBERON:0002095!8.57e-11!3;UBERON:0004782!8.57e-11!3;UBERON:0003281!8.57e-11!3;UBERON:0009664!8.57e-11!3;UBERON:0002296!8.57e-11!3;UBERON:0005602!8.57e-11!3;UBERON:0001179!8.57e-11!3;UBERON:0006293!8.57e-11!3;UBERON:0000178!1.02e-10!15;UBERON:0000179!1.02e-10!15;UBERON:0000463!1.02e-10!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;4.85e-10;1!UBERON:0001154;4.85e-10;1!UBERON:0001153;4.85e-10;1!UBERON:0009854;4.85e-10;1!UBERON:0001961;4.85e-10;1!UBERON:0001744;4.85e-10;1!UBERON:0001042;4.85e-10;1!UBERON:0001735;4.85e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,4.44e-10,1;UBERON:0001961,4.44e-10,1;UBERON:0001744,4.44e-10,1;UBERON:0001735,4.44e-10,1;UBERON:0001154,5.30e-10,1;UBERON:0001153,5.30e-10,1;UBERON:0001045,5.30e-10,1 | |||
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| ||
|short_description=p1@ENST00000541361 | |short_description=p1@ENST00000541361 | ||
}} | }} |
Latest revision as of 08:44, 30 July 2015
Short description: | p1@ENST00000541361 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000541361_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 0bp_to_ENST00000541361_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 4.61e-103 | 14 |
lymphocyte of B lineage | 2.20e-90 | 24 |
pro-B cell | 2.20e-90 | 24 |
lymphoid lineage restricted progenitor cell | 2.32e-40 | 52 |
lymphocyte | 1.50e-39 | 53 |
common lymphoid progenitor | 1.50e-39 | 53 |
mature B cell | 4.89e-18 | 2 |
pre-B-II cell | 4.89e-18 | 2 |
transitional stage B cell | 4.89e-18 | 2 |
small pre-B-II cell | 4.89e-18 | 2 |
immature B cell | 4.89e-18 | 2 |
nongranular leukocyte | 1.29e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 8.11e-16 | 120 |
leukocyte | 1.20e-13 | 136 |
precursor B cell | 2.38e-12 | 3 |
hematopoietic oligopotent progenitor cell | 4.10e-11 | 161 |
hematopoietic multipotent progenitor cell | 4.10e-11 | 161 |
hematopoietic stem cell | 1.54e-10 | 168 |
B-1 B cell | 6.33e-10 | 1 |
hematopoietic cell | 7.28e-10 | 177 |
antibody secreting cell | 7.55e-10 | 1 |
plasma cell | 7.55e-10 | 1 |
plasmablast | 7.55e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
tonsil | 4.44e-10 | 1 |
mucosa-associated lymphoid tissue | 4.44e-10 | 1 |
lymphoid tissue | 4.44e-10 | 1 |
tonsillar ring | 4.44e-10 | 1 |
vermiform appendix | 5.30e-10 | 1 |
caecum | 5.30e-10 | 1 |
midgut | 5.30e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 6.33e-10 | 1 |
lymphosarcoma | 6.33e-10 | 1 |
lymphoma | 1.86e-08 | 10 |