FFCP PHASE1:Hg19::chr15:59904033..59904043,+: Difference between revisions
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|id=chr15:59904033..59904043,+
|short_description=p14@GCNT3
|description=CAGE_peak_14_at_GCNT3_5end
|association_with_transcript=50bp_to_ENST00000396065,ENST0000056...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9245 | |EntrezGene=9245 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4205 | |HGNC=4205 | ||
|TSSclassifier=strong | |||
|UniProt=O95395 | |UniProt=O95395 | ||
|association_with_transcript=50bp_to_ENST00000396065,ENST00000560585_5end | |||
|cluster_id=chr15:59904033..59904043,+ | |||
|coexpression_cluster_id=C1211 | |||
|description=CAGE_peak_14_at_GCNT3_5end | |||
|id=chr15:59904033..59904043,+ | |||
|ontology_enrichment_celltype=CL:0000499!7.86e-09!27;CL:1000497!9.51e-08!18;CL:0002518!9.51e-08!18;CL:0000066!1.06e-07!254;CL:0002150!4.95e-07!3;CL:0000861!4.95e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:1000497;3.50e-10;17!CL:0002518;3.50e-10;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,3.55e-10,17;CL:0002518,3.55e-10,17 | |||
|ontology_enrichment_development_v019=UBERON:0003918;3.43e-08;10!UBERON:0007687;3.43e-08;10!UBERON:0009847;2.79e-07;3!UBERON:0003353;2.79e-07;3 | |||
|ontology_enrichment_disease=DOID:305!1.18e-13!106;DOID:0050687!4.01e-08!143;DOID:299!4.17e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:4468;2.72e-10;2!DOID:4929;2.72e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,2.27e-10,2;DOID:4468,3.27e-10,2;DOID:305,4.97e-08,106;DOID:7,9.31e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0000466!5.39e-07!126;UBERON:0001007!7.04e-07!155;UBERON:0001555!7.04e-07!155;UBERON:0007026!7.04e-07!155;UBERON:0003886!7.76e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;2.23e-07;24!UBERON:0011143;2.23e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,7.56e-07,26;UBERON:0003918,7.56e-07,26;UBERON:0011143,7.56e-07,26;UBERON:0005095,7.56e-07,26;UBERON:0007687,7.56e-07,26 | |||
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| ||
|short_description=p14@GCNT3 | |||
}} | }} |
Latest revision as of 09:07, 18 September 2015
Short description: | p14@GCNT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_GCNT3_5end |
Coexpression cluster: | C1211_small_lung_bile_clear_colon_rectal_tubular |
Association with transcript: | 50bp_to_ENST00000396065, ENST00000560585_5end |
EntrezGene: | GCNT3 |
HGNC: | 4205 |
UniProt: | O95395 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 3.55e-10 | 17 |
kidney epithelial cell | 3.55e-10 | 17 |
Ontology term | p-value | n |
---|---|---|
kidney | 7.56e-07 | 26 |
kidney mesenchyme | 7.56e-07 | 26 |
upper urinary tract | 7.56e-07 | 26 |
kidney rudiment | 7.56e-07 | 26 |
kidney field | 7.56e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 2.27e-10 | 2 |
clear cell adenocarcinoma | 3.27e-10 | 2 |
carcinoma | 4.97e-08 | 106 |
disease of anatomical entity | 9.31e-08 | 39 |