FFCP PHASE1:Hg19::chr6:26199395..26199400,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8351 | |EntrezGene=8351 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4767 | |HGNC=4767 | ||
|TSSclassifier=strong | |||
|UniProt=P68431 | |UniProt=P68431 | ||
|association_with_transcript=63bp_to_NM_003530,uc003ngv.2_5end | |association_with_transcript=63bp_to_NM_003530,uc003ngv.2_5end | ||
|cluster_id=chr6:26199395..26199400,- | |||
|description=CAGE_peak_12_at_HIST1H3D_5end | |description=CAGE_peak_12_at_HIST1H3D_5end | ||
|id=chr6:26199395..26199400,- | |id=chr6:26199395..26199400,- | ||
|ontology_enrichment_celltype=CL:0000012!1.43e-14!682;CL:0000066!1.50e-14!254;CL:0000548!8.53e-14!679;CL:0000004!8.53e-14!679;CL:0000255!8.53e-14!679;CL:0000003!2.17e-10!722;CL:0002321!3.11e-09!248;CL:0000220!5.05e-09!246;CL:0000076!1.10e-07!62;CL:0000115!3.05e-07!35;CL:0000213!3.17e-07!57;CL:0000215!3.17e-07!57;CL:0000063!3.55e-07!578 | |ontology_enrichment_celltype=CL:0000012!1.43e-14!682;CL:0000066!1.50e-14!254;CL:0000548!8.53e-14!679;CL:0000004!8.53e-14!679;CL:0000255!8.53e-14!679;CL:0000003!2.17e-10!722;CL:0002321!3.11e-09!248;CL:0000220!5.05e-09!246;CL:0000076!1.10e-07!62;CL:0000115!3.05e-07!35;CL:0000213!3.17e-07!57;CL:0000215!3.17e-07!57;CL:0000063!3.55e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000071;5.35e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.11e-12,253;CL:0000115,1.01e-07,36;CL:0000945,6.18e-07,24;CL:0000826,6.18e-07,24;CL:0000213,6.22e-07,58;CL:0000215,6.22e-07,58;CL:0000071,6.40e-07,18;CL:0002546,6.40e-07,18;CL:0002078,7.08e-07,45;CL:0000076,7.75e-07,63;CL:0002321,9.60e-07,250 | |||
|ontology_enrichment_development_v019=CL:0002546;5.35e-07;18 | |||
|ontology_enrichment_disease=DOID:162!1.45e-35!235;DOID:14566!1.42e-34!239;DOID:2531!2.22e-23!51;DOID:0060083!2.22e-23!51;DOID:0050686!7.78e-21!137;DOID:1240!1.99e-18!39;DOID:0050687!2.67e-15!143;DOID:8692!1.40e-13!31;DOID:305!2.90e-11!106;DOID:0060058!3.77e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:2531;4.65e-16;51!DOID:0060083;4.65e-16;51!DOID:1240;1.74e-15;39!DOID:8692;2.83e-14;31!DOID:0060058;1.01e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.55e-36,235;DOID:14566,2.40e-35,239;DOID:2531,8.99e-26,51;DOID:0060083,8.99e-26,51;DOID:0050686,2.18e-22,137;DOID:1240,4.79e-20,39;DOID:0050687,1.58e-15,143;DOID:8692,9.85e-15,31;DOID:305,3.35e-11,106;DOID:0060058,1.09e-07,10 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000490;4.15e-07;33!UBERON:0004638;5.35e-07;18!UBERON:0001986;5.35e-07;18!UBERON:0004852;5.35e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,6.40e-07,18;UBERON:0001986,6.40e-07,18;UBERON:0004852,6.40e-07,18 | |||
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| ||
|short_description=p12@HIST1H3D | |short_description=p12@HIST1H3D | ||
}} | }} |
Latest revision as of 08:59, 17 September 2015
Short description: | p12@HIST1H3D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_HIST1H3D_5end |
Coexpression cluster: | NA |
Association with transcript: | 63bp_to_NM_003530, uc003ngv.2_5end |
EntrezGene: | HIST1H3D |
HGNC: | 4767 |
UniProt: | P68431 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.11e-12 | 253 |
endothelial cell | 1.01e-07 | 36 |
lymphocyte of B lineage | 6.18e-07 | 24 |
pro-B cell | 6.18e-07 | 24 |
lining cell | 6.22e-07 | 58 |
barrier cell | 6.22e-07 | 58 |
blood vessel endothelial cell | 6.40e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.40e-07 | 18 |
meso-epithelial cell | 7.08e-07 | 45 |
squamous epithelial cell | 7.75e-07 | 63 |
embryonic cell | 9.60e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 6.40e-07 | 18 |
endothelium | 6.40e-07 | 18 |
cardiovascular system endothelium | 6.40e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.55e-36 | 235 |
disease of cellular proliferation | 2.40e-35 | 239 |
hematologic cancer | 8.99e-26 | 51 |
immune system cancer | 8.99e-26 | 51 |
organ system cancer | 2.18e-22 | 137 |
leukemia | 4.79e-20 | 39 |
cell type cancer | 1.58e-15 | 143 |
myeloid leukemia | 9.85e-15 | 31 |
carcinoma | 3.35e-11 | 106 |
lymphoma | 1.09e-07 | 10 |