FFCP PHASE1:Hg19::chr6:56716611..56716618,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100652766,667 | |EntrezGene=100652766,667 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1090 | |HGNC=1090 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=37bp_to_ENST00000524302_5end | |association_with_transcript=37bp_to_ENST00000524302_5end | ||
|cluster_id=chr6:56716611..56716618,- | |||
|description=CAGE_peak_36_at_DST_5end | |description=CAGE_peak_36_at_DST_5end | ||
|id=chr6:56716611..56716618,- | |id=chr6:56716611..56716618,- | ||
|ontology_enrichment_celltype=CL:0002139!1.34e-10!24;CL:0002620!2.96e-10!23;CL:0000071!4.63e-08!18;CL:0002546!4.63e-08!18;CL:0000057!1.29e-07!75;CL:0000055!4.60e-07!180 | |ontology_enrichment_celltype=CL:0002139!1.34e-10!24;CL:0002620!2.96e-10!23;CL:0000071!4.63e-08!18;CL:0002546!4.63e-08!18;CL:0000057!1.29e-07!75;CL:0000055!4.60e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0002139;3.12e-25;24!CL:0000071;3.07e-19;18!CL:0002618;3.63e-15;3!CL:0002543;6.51e-13;6!CL:0000115;9.46e-13;36!CL:0002078;5.21e-09;45!CL:1000413;3.19e-08;9!CL:0002138;1.55e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.52e-25,24;CL:0000071,2.95e-19,18;CL:0002546,2.95e-19,18;CL:0000115,4.88e-16,36;CL:0002618,6.94e-15,3;CL:0002543,1.35e-12,6;CL:0002078,2.48e-12,45;CL:0000213,5.07e-09,58;CL:0000215,5.07e-09,58;CL:1000413,2.39e-08,9;CL:0005020,1.30e-07,6;CL:0002138,1.30e-07,6;CL:0005022,1.30e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;3.07e-19;18!CL:0005022;1.55e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!4.94e-13!286;UBERON:0000475!6.49e-12!365;UBERON:0003075!1.07e-11!86;UBERON:0007284!1.07e-11!86;UBERON:0000483!6.13e-11!309;UBERON:0004111!8.46e-11!241;UBERON:0000119!8.97e-11!312;UBERON:0002346!2.04e-10!90;UBERON:0001049!2.96e-10!57;UBERON:0005068!2.96e-10!57;UBERON:0006241!2.96e-10!57;UBERON:0007135!2.96e-10!57;UBERON:0002049!7.43e-10!79;UBERON:0007798!7.43e-10!79;UBERON:0002616!7.86e-10!59;UBERON:0000025!8.39e-10!194;UBERON:0000955!8.89e-10!69;UBERON:0006238!8.89e-10!69;UBERON:0007023!1.41e-09!115;UBERON:0001017!3.31e-09!82;UBERON:0000055!8.79e-09!69;UBERON:0000073!9.15e-09!94;UBERON:0001016!9.15e-09!94;UBERON:0006914!1.09e-08!25;UBERON:0000468!1.11e-08!659;UBERON:0004121!1.27e-08!169;UBERON:0005743!1.31e-08!86;UBERON:0000033!2.78e-08!123;UBERON:0001986!4.63e-08!18;UBERON:0004638!4.63e-08!18;UBERON:0004852!4.63e-08!18;UBERON:0000487!5.41e-08!22;UBERON:0000153!5.46e-08!129;UBERON:0007811!5.46e-08!129;UBERON:0000924!6.29e-08!173;UBERON:0006601!6.29e-08!173;UBERON:0000467!6.57e-08!625;UBERON:0000480!8.45e-08!626;UBERON:0001981!9.43e-08!60;UBERON:0007500!9.43e-08!60;UBERON:0004537!9.43e-08!60;UBERON:0006965!9.43e-08!60;UBERON:0003080!7.81e-07!42 | |ontology_enrichment_uberon=UBERON:0000477!4.94e-13!286;UBERON:0000475!6.49e-12!365;UBERON:0003075!1.07e-11!86;UBERON:0007284!1.07e-11!86;UBERON:0000483!6.13e-11!309;UBERON:0004111!8.46e-11!241;UBERON:0000119!8.97e-11!312;UBERON:0002346!2.04e-10!90;UBERON:0001049!2.96e-10!57;UBERON:0005068!2.96e-10!57;UBERON:0006241!2.96e-10!57;UBERON:0007135!2.96e-10!57;UBERON:0002049!7.43e-10!79;UBERON:0007798!7.43e-10!79;UBERON:0002616!7.86e-10!59;UBERON:0000025!8.39e-10!194;UBERON:0000955!8.89e-10!69;UBERON:0006238!8.89e-10!69;UBERON:0007023!1.41e-09!115;UBERON:0001017!3.31e-09!82;UBERON:0000055!8.79e-09!69;UBERON:0000073!9.15e-09!94;UBERON:0001016!9.15e-09!94;UBERON:0006914!1.09e-08!25;UBERON:0000468!1.11e-08!659;UBERON:0004121!1.27e-08!169;UBERON:0005743!1.31e-08!86;UBERON:0000033!2.78e-08!123;UBERON:0001986!4.63e-08!18;UBERON:0004638!4.63e-08!18;UBERON:0004852!4.63e-08!18;UBERON:0000487!5.41e-08!22;UBERON:0000153!5.46e-08!129;UBERON:0007811!5.46e-08!129;UBERON:0000924!6.29e-08!173;UBERON:0006601!6.29e-08!173;UBERON:0000467!6.57e-08!625;UBERON:0000480!8.45e-08!626;UBERON:0001981!9.43e-08!60;UBERON:0007500!9.43e-08!60;UBERON:0004537!9.43e-08!60;UBERON:0006965!9.43e-08!60;UBERON:0003080!7.81e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.07e-19;18!UBERON:0001986;3.07e-19;18!UBERON:0004852;3.07e-19;18!UBERON:0000487;4.59e-19;22!UBERON:0006914;1.51e-16;25!UBERON:0000490;5.82e-13;33!UBERON:0002066;2.80e-09;5!UBERON:0001638;1.25e-08;9!UBERON:0003920;1.25e-08;9!UBERON:0004582;1.25e-08;9!UBERON:0003915;3.19e-08;9!UBERON:0004700;3.19e-08;9!UBERON:0001917;3.19e-08;9!UBERON:0003978;5.75e-07;3!UBERON:0000946;5.75e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.95e-19,18;UBERON:0001986,2.95e-19,18;UBERON:0004852,2.95e-19,18;UBERON:0000487,5.00e-19,22;UBERON:0006914,1.62e-16,25;UBERON:0000055,7.92e-12,68;UBERON:0002049,6.74e-10,78;UBERON:0007798,6.74e-10,78;UBERON:0002066,4.09e-09,5;UBERON:0007500,1.11e-08,59;UBERON:0001981,1.11e-08,59;UBERON:0004537,1.11e-08,59;UBERON:0006965,1.11e-08,59;UBERON:0001638,2.01e-08,9;UBERON:0003920,2.01e-08,9;UBERON:0004582,2.01e-08,9;UBERON:0003915,2.39e-08,9;UBERON:0004700,2.39e-08,9;UBERON:0001917,2.39e-08,9;UBERON:0003978,6.72e-07,3;UBERON:0009751,6.72e-07,3;UBERON:0000946,6.72e-07,3;UBERON:0002523,6.72e-07,3;UBERON:0005983,6.72e-07,3;UBERON:0002165,6.72e-07,3;UBERON:0002062,6.72e-07,3;UBERON:0007280,6.72e-07,3 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,0,0.495065411840187,1.32558950291166,0.672325146451775,0,0.730310090387373,0,0.246242116153576,0,0.313454721478088,0.85870796139317,0.136874425072884,0.627713197974014,1.37544130346312,1.23150884174919,1.81034797021462,0,0,0,0,0,0,0,1.9903692548239,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,1.0843174571537,0,0.144846518960824,0,0,0.756278537312543,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,1.98762407366705,0.860234595106124,0.347140501607594,1.13061588384802,1.25849830862972,1.37559020970034,0.417989933073621,2.06733407335463,1.42306505074684,1.33888245105868,0.805658634218294,0,1.46437234528902,0.735326160691737,0,2.32179293538607,3.81699933464489,1.0135033243499,0,0,1.09921046358244,0,0,0,0,0.25326102332916,0.926864265692532,0.286836620748814,0.354668382198357,0,0,0,0.622422070799533,0.942974704487816,0.163461903113459,0,0,0,0,0,0.149448680551801,0.469737994575059,0.161872944368132,0.98315564691574,1.02077085627447,0.368502951935304,0.929932030581889,0,0,0,0,0.505008341862199,0.750711119231785,0.831192346452549,0,0.30648779579902,0,0.226864366320042,1.97328599257748,0.213557388818567,0.635795703478686,0.900273288253207,0.92747276314595,0.257640540045629,0.930584281657949,1.18143432568886,0.292311015483596,2.01947019395292,0.184099797284599,0.323292113637624,2.84007674013291,0.503760491138201,1.01736355386293,0,0,0,0.121973706129595,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0.109750285408626,0,0,0,0,0,0,0.34779121492523,0.117408694235822,0.433099343283221,0,0.570762456703795,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.723906533337896,0.61642896765115,0.179060963239896,0,0,0,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0.500170521059677,0,0.415941723061614,0.356857977594324,0.315404830067869,0.585707074963566,0.601892199455438,0,0,0,0.184369168541703,0.347534457872331,0,0,0,0,0,0,0,0,0,0.767309866440312,0.280660094433074,0.128139149255701,0.511707249066704,0.160853921143607,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.232420756919918,0,0.200506470303285,0,0.229628896329213,0,0.262248829918848,0,0.15403067420883,0,0,0.211103257785751,0,0,0.863663664408557,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.206082023295445,0,0,0,0,0,0.193341436584244,0,0,0.137836572484531,0.966782203814463,0.290033387828457,0.170453254832202,0.0890320356467374,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0.429374660225974,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0.353437207037059,0,0,0,0,0.243713489631284,0,0.409499734223957,0.282810863907425,1.13008116620243,0.551365343546124,0,0,0,0,0.202910376962704,0.30982349809975,0,0.717056761020258,0.196498082026242,0,0.354761064070598,0.211107635297664,0.329294892959902,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0.242721043499027,0,1.13654458722565,0,0.296964680832639,0.614321404198464,0,0.703347082052564,0.333926115068718,0,0,0.19924798825107,0.276283915531148,0,1.22722419002586,3.56945935837101,0.311039587661807,0.539210106883961,0,0,0.197286811273867,0,2.22273980289274,0,0.371072392647405,0,0,0,0.724999575434793,0,0.762760950878299,0.472775363535873,0,0,0,0,0,0,0.774054819518572,0.295547618953547,0.219385397153973,0,0,0.692552326534174,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0.995261931078505,0.0884575645033392,0.611030144933625,0,0,0,0.202203398942031,0.802577647298789,0.234264445725339,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0.416024019039416,0,0,0.0870592065804026,0.17472666824203,2.0638323896594,0,0,0,0.387956065953678,0,0.225980740780532,0,0,0.379864775735272,0,0.721429382263803,0,0,0,0.687219576995494,0,0,0.99402028452346,0,0.543616824294456,0.627617077873999,0,0,0.600420288709789,1.09524303113594,0,0.429765441419957,0,1.11712960508902,1.3749625440701,0.717873024576814,0,0,0.446342914883745,0.201550417460179,0.360299883542404,0,0,0,0,0.78741985211799,0.0846733320657845,0,0.544813624446302,0,0,0,0,0,0.485996453264197,0,0.0788057072991982,0.104909176269996,2.64000841298516,0,0,0,0,0,0,0,0,1.19730191562487,0,0.681552087141687,0,0,0,0.775697738169303,0.39669780522807,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0.488105059607853,1.251909307065,0.573409195690071,0.443716206147409,0.372578417648301,0,0.499921631848426,0,0.285465333544967,0.235265819698172,0,0,0,0.233713309847224,0.554805861502613,0.568209015825267,0.50313580350515,0,0,0,0,0.1478551499896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| ||
|short_description=p36@DST | |short_description=p36@DST | ||
}} | }} |
Latest revision as of 10:02, 19 September 2015
Short description: | p36@DST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_36_at_DST_5end |
Coexpression cluster: | NA |
Association with transcript: | 37bp_to_ENST00000524302_5end |
EntrezGene: | 100652766,667 |
HGNC: | 1090 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.52e-25 | 24 |
blood vessel endothelial cell | 2.95e-19 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.95e-19 | 18 |
endothelial cell | 4.88e-16 | 36 |
endothelial cell of umbilical vein | 6.94e-15 | 3 |
vein endothelial cell | 1.35e-12 | 6 |
meso-epithelial cell | 2.48e-12 | 45 |
lining cell | 5.07e-09 | 58 |
barrier cell | 5.07e-09 | 58 |
endothelial cell of artery | 2.39e-08 | 9 |
lymphangioblast | 1.30e-07 | 6 |
endothelial cell of lymphatic vessel | 1.30e-07 | 6 |
vascular lymphangioblast | 1.30e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.95e-19 | 18 |
endothelium | 2.95e-19 | 18 |
cardiovascular system endothelium | 2.95e-19 | 18 |
simple squamous epithelium | 5.00e-19 | 22 |
squamous epithelium | 1.62e-16 | 25 |
vessel | 7.92e-12 | 68 |
vasculature | 6.74e-10 | 78 |
vascular system | 6.74e-10 | 78 |
umbilical vein | 4.09e-09 | 5 |
epithelial tube open at both ends | 1.11e-08 | 59 |
blood vessel | 1.11e-08 | 59 |
blood vasculature | 1.11e-08 | 59 |
vascular cord | 1.11e-08 | 59 |
vein | 2.01e-08 | 9 |
venous blood vessel | 2.01e-08 | 9 |
venous system | 2.01e-08 | 9 |
endothelial tube | 2.39e-08 | 9 |
arterial system endothelium | 2.39e-08 | 9 |
endothelium of artery | 2.39e-08 | 9 |
valve | 6.72e-07 | 3 |
cardiac mesenchyme | 6.72e-07 | 3 |
cardial valve | 6.72e-07 | 3 |
tunica intima | 6.72e-07 | 3 |
heart layer | 6.72e-07 | 3 |
endocardium | 6.72e-07 | 3 |
endocardial cushion | 6.72e-07 | 3 |
presumptive endocardium | 6.72e-07 | 3 |