FFCP PHASE1:Hg19::chr7:29603552..29603566,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222171 | |EntrezGene=222171 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22310 | |HGNC=22310 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IV56,A4D1A1 | |UniProt=Q8IV56,A4D1A1 | ||
|association_with_transcript=125bp_to_ENST00000319694,NM_175887,uc003tac.1_5end | |association_with_transcript=125bp_to_ENST00000319694,NM_175887,uc003tac.1_5end | ||
|cluster_id=chr7:29603552..29603566,+ | |||
|coexpression_cluster_id=C360 | |||
|description=CAGE_peak_5_at_PRR15_5end | |description=CAGE_peak_5_at_PRR15_5end | ||
|id=chr7:29603552..29603566,+ | |id=chr7:29603552..29603566,+ | ||
|ontology_enrichment_celltype=CL:0000066!8.64e-07!254 | |ontology_enrichment_celltype=CL:0000066!8.64e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.77e-15;19!CL:0002577;3.71e-13;3!CL:0002541;5.80e-12;3!CL:0002536;2.00e-09;2!CL:0002554;2.25e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.55e-15,19;CL:0002577,3.52e-13,3;CL:0002541,1.21e-11,3;CL:0002536,2.01e-09,2;CL:0002554,2.26e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!5.38e-13!106;DOID:299!1.25e-09!25;DOID:0050687!2.55e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.60e-11!14;UBERON:0000158!2.60e-11!14;UBERON:0003124!5.12e-09!7;UBERON:0004119!1.14e-07!169;UBERON:0000925!1.14e-07!169;UBERON:0006595!1.14e-07!169;UBERON:0000466!1.59e-07!126;UBERON:0000077!2.95e-07!130;UBERON:0004921!8.13e-07!129;UBERON:0004185!8.13e-07!129;UBERON:0000478!9.52e-07!24 | |ontology_enrichment_uberon=UBERON:0005631!2.60e-11!14;UBERON:0000158!2.60e-11!14;UBERON:0003124!5.12e-09!7;UBERON:0004119!1.14e-07!169;UBERON:0000925!1.14e-07!169;UBERON:0006595!1.14e-07!169;UBERON:0000466!1.59e-07!126;UBERON:0000077!2.95e-07!130;UBERON:0004921!8.13e-07!129;UBERON:0004185!8.13e-07!129;UBERON:0000478!9.52e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.13e-13;10!UBERON:0000158;1.13e-13;10!UBERON:0003124;5.80e-12;3!UBERON:0000920;5.80e-12;3!UBERON:0000478;6.90e-12;24!UBERON:0001987;5.75e-10;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.03e-21,14;UBERON:0000158,2.03e-21,14;UBERON:0003124,1.16e-19,7;UBERON:0000478,9.15e-12,24;UBERON:0000920,1.21e-11,3;UBERON:0001987,5.54e-10,4;UBERON:0004340,5.54e-10,4;UBERON:0004871,3.44e-08,8 | |||
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| 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| ||
|short_description=p5@PRR15 | |short_description=p5@PRR15 | ||
}} | }} |
Latest revision as of 04:33, 18 September 2015
Short description: | p5@PRR15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PRR15_5end |
Coexpression cluster: | C360_Placental_Amniotic_amniotic_teratocarcinoma_chorionic_neuroblastoma_H9 |
Association with transcript: | 125bp_to_ENST00000319694, NM_175887, uc003tac.1_5end |
EntrezGene: | PRR15 |
HGNC: | 22310 |
UniProt: | Q8IV56A4D1A1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.55e-15 | 19 |
placental epithelial cell | 3.52e-13 | 3 |
chorionic membrane mesenchymal stem cell | 1.21e-11 | 3 |
amniotic epithelial cell | 2.01e-09 | 2 |
fibroblast of lymphatic vessel | 2.26e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.03e-21 | 14 |
membranous layer | 2.03e-21 | 14 |
chorion | 1.16e-19 | 7 |
extraembryonic structure | 9.15e-12 | 24 |
egg chorion | 1.21e-11 | 3 |
placenta | 5.54e-10 | 4 |
allantois | 5.54e-10 | 4 |
somatic layer of lateral plate mesoderm | 3.44e-08 | 8 |