FFCP PHASE1:Hg19::chr15:80842672..80842689,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:80842672..80842689,-
|short_description=p@chr15:80842672..80842689,-
|description=CAGE_peak_at_chr15:80842672..80842689,-
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:80842672..80842689,- | |||
|coexpression_cluster_id=C3522 | |||
|description=CAGE_peak_at_chr15:80842672..80842689,- | |||
|id=chr15:80842672..80842689,- | |||
|ontology_enrichment_celltype=CL:0000055!6.21e-35!180;CL:0000057!6.51e-29!75;CL:0002620!7.90e-22!23;CL:0000680!6.51e-14!57;CL:0000056!6.51e-14!57;CL:0000355!6.51e-14!57;CL:0000187!3.00e-13!54;CL:0000183!1.75e-12!59;CL:0000393!5.35e-11!60;CL:0000211!5.35e-11!60;CL:0000192!6.96e-11!42;CL:0000514!6.96e-11!42;CL:0000048!9.43e-10!430;CL:0000359!2.06e-09!32;CL:0000723!3.22e-09!436;CL:0000034!1.54e-08!444;CL:0000222!6.43e-08!119;CL:0002556!9.21e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.36e-24;23!CL:1000306;4.80e-12;4!CL:0002547;4.80e-12;4!CL:0000057;1.95e-08;73!CL:0000708;5.17e-08;3!CL:0002590;1.61e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,4.07e-24,23;CL:0000057,1.81e-21,76;CL:1000306,3.25e-12,4;CL:0002547,3.25e-12,4;CL:0000708,5.45e-08,3;CL:0002590,1.30e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.01e-07!5;DOID:450!1.01e-07!5;DOID:66!1.01e-07!5;DOID:423!1.01e-07!5;DOID:0080000!1.01e-07!5;DOID:11722!1.01e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;3.19e-16;5!DOID:450;3.19e-16;5!DOID:66;3.19e-16;5!DOID:423;3.19e-16;5!DOID:0080000;3.19e-16;5!DOID:11722;3.19e-16;5!DOID:1192;2.67e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.14e-16,5;DOID:450,4.14e-16,5;DOID:66,4.14e-16,5;DOID:423,4.14e-16,5;DOID:0080000,4.14e-16,5;DOID:11722,4.14e-16,5;DOID:1192,1.69e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000914!5.79e-16!83;UBERON:0002329!5.79e-16!83;UBERON:0003077!5.79e-16!83;UBERON:0003059!5.79e-16!83;UBERON:0007282!5.79e-16!83;UBERON:0009618!5.79e-16!83;UBERON:0007285!5.79e-16!83;UBERON:0004290!3.20e-14!70;UBERON:0000475!3.82e-14!365;UBERON:0002097!1.11e-13!40;UBERON:0001134!2.38e-12!61;UBERON:0002036!2.38e-12!61;UBERON:0003082!2.38e-12!61;UBERON:0002199!2.93e-12!45;UBERON:0002416!2.93e-12!45;UBERON:0000486!5.54e-12!82;UBERON:0002385!1.20e-11!63;UBERON:0001015!1.20e-11!63;UBERON:0000383!1.20e-11!63;UBERON:0005256!1.38e-10!143;UBERON:0003102!3.32e-08!95;UBERON:0001758!9.21e-08!6;UBERON:0003672!9.21e-08!6;UBERON:0002100!1.22e-07!216;UBERON:0000119!1.88e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;7.76e-15;41!UBERON:0002199;1.86e-14;46!UBERON:0002416;1.86e-14;46!UBERON:0004797;4.80e-12;4!UBERON:0000415;4.80e-12;4!UBERON:0007240;4.80e-12;4!UBERON:0005742;4.80e-12;4!UBERON:0005734;4.80e-12;4!UBERON:0004664;4.80e-12;4!UBERON:0004663;4.80e-12;4!UBERON:0003102;2.36e-10;50!UBERON:0000947;5.11e-08;21!UBERON:0010191;5.11e-08;21!UBERON:0003210;5.17e-08;3!UBERON:0004573;9.94e-07;33!UBERON:0004571;9.94e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,6.62e-21,41;UBERON:0002199,2.67e-18,46;UBERON:0002416,2.67e-18,46;UBERON:0000415,3.25e-12,4;UBERON:0007240,3.25e-12,4;UBERON:0005742,3.25e-12,4;UBERON:0005734,3.25e-12,4;UBERON:0004664,3.25e-12,4;UBERON:0004663,3.25e-12,4;UBERON:0003102,2.25e-09,99;UBERON:0000947,4.49e-08,21;UBERON:0010191,4.49e-08,21;UBERON:0003210,5.45e-08,3;UBERON:0004797,3.70e-07,7 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.563817616383885,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,1.20538905604795,1.46062018077475,0,0.246242116153576,1.02000345622126,0.313454721478088,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.361439152384566,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,1.77282716330412,8.73900593367244,2.58152958673932,0.709336764396714,1.12135520028461,0,0.24666754841716,0.933633106199299,0,0,0.454072282934794,0,0.234321431833797,0,0,0.149448680551801,0.23486899728753,0.485618833104395,0.98315564691574,0.204154171254893,0.368502951935304,0,0,0,0.910161361938026,0.718618141816238,0.505008341862199,0.375355559615893,1.6623846929051,2.19488810440419,0.919463387397059,0.300476117813194,0,4.84352016359927,1.06778694409284,1.27159140695737,2.70081986475962,0.824420233907511,2.57640540045629,1.8611685633159,1.0126579934476,0.487185025805993,2.01947019395292,0.828449087780694,3.39456719319505,3.55009592516614,0.906768884048762,2.20428770003634,0,0,0,0,0,0,0,0,0,0,0,4.14404764057442,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.93376771119587,3.05172048183296,0.95339771567235,0.387815147273333,0,0,0.797814349754612,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,1.42636905040718,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.178428988797162,0,0.35142424497814,0.902838299183157,0,0,0,0,0.695068915744663,1.56640925970192,0,0,0,0,0,0,0,0.992431231275107,0.61384789315225,0,1.28139149255701,0.511707249066704,0.482561763430822,0,0.154209693802656,0,0,0,0.348631135379878,0,0,0,0.34444334449382,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,3.21367859688319,0,0,0,0.689182862422653,0.214840489736547,0.145016693914229,0.170453254832202,0.267096106940212,0,0,0,0,0.929691098594572,3.46293581513704,0.6970372701606,0.308033580176089,0,0,0.18532421910392,0,2.232950216158,1.58189712359363,0.38126038784765,0,0,2.22742273548156,0,1.07923474549989,0,0.471249609382746,0.202182481573316,0,0,0.48763373908959,0.487426979262569,0,0.409499734223957,0,0,0,0,0.876901770507525,0.578775534266688,0,0,0.30982349809975,0.281695602532241,0.860468113224309,0.0982490410131212,0.35667105148125,0,0,0.329294892959902,0.75894634753143,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0,0,3.42143546427988,0.449341755736634,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,1.52581736317083,0.110579259931225,0,0.219385397153973,0,0,0,0.341826167541004,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0.34823682632161,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0.480952921509202,0,0,0,0,0,0,0,0,0.135904206073614,0,0.203996435272644,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0.0671834724867263,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0.50313580350515,0.889811221596536,0,0,0.15543720058278,0.147855149989634,0.159296767163702,0,0,0,0.265841714557995,0,0.300515217994437,0,0.406870733204662,0.181848659202559,0,1.39210127963548,0,0.400027764663154,0.343395705182793,0,0,0.385239660814607,0,0,0.453411851024545,0.463044948647668,0.244736704506468,0.358177682162975,0,0,1.06013487567529,0.964570191354574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0.184105950251841,0,0,0,0,0,0,0,0.212574920101683,0,0,1.90802610392051,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0.690359926060101,0,0,0.40341013740704,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.342976018874837,0.135939465953663,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0.332660356546013,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.363356758541113,0.428201047781966,0.563817616383885,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,1.20538905604795,1.46062018077475,0,0.246242116153576,1.02000345622126,0.313454721478088,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.361439152384566,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,1.77282716330412,8.73900593367244,2.58152958673932,0.709336764396714,1.12135520028461,0,0.24666754841716,0.933633106199299,0,0,0.454072282934794,0,0.234321431833797,0,0,0.149448680551801,0.23486899728753,0.485618833104395,0.98315564691574,0.204154171254893,0.368502951935304,0,0,0,0.910161361938026,0.718618141816238,0.505008341862199,0.375355559615893,1.6623846929051,2.19488810440419,0.919463387397059,0.300476117813194,0,4.84352016359927,1.06778694409284,1.27159140695737,2.70081986475962,0.824420233907511,2.57640540045629,1.8611685633159,1.0126579934476,0.487185025805993,2.01947019395292,0.828449087780694,3.39456719319505,3.55009592516614,0.906768884048762,2.20428770003634,0,0,0,0,0,0,0,0,0,0,0,4.14404764057442,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.93376771119587,3.05172048183296,0.95339771567235,0.387815147273333,0,0,0.797814349754612,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,1.42636905040718,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.178428988797162,0,0.35142424497814,0.902838299183157,0,0,0,0,0.695068915744663,1.56640925970192,0,0,0,0,0,0,0,0.992431231275107,0.61384789315225,0,1.28139149255701,0.511707249066704,0.482561763430822,0,0.154209693802656,0,0,0,0.348631135379878,0,0,0,0.34444334449382,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,3.21367859688319,0,0,0,0.689182862422653,0.214840489736547,0.145016693914229,0.170453254832202,0.267096106940212,0,0,0,0,0.929691098594572,3.46293581513704,0.6970372701606,0.308033580176089,0,0,0.18532421910392,0,2.232950216158,1.58189712359363,0.38126038784765,0,0,2.22742273548156,0,1.07923474549989,0,0.471249609382746,0.202182481573316,0,0,0.48763373908959,0.487426979262569,0,0.409499734223957,0,0,0,0,0.876901770507525,0.578775534266688,0,0,0.30982349809975,0.281695602532241,0.860468113224309,0.0982490410131212,0.35667105148125,0,0,0.329294892959902,0.75894634753143,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0,0,3.42143546427988,0.449341755736634,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,1.52581736317083,0.110579259931225,0,0.219385397153973,0,0,0,0.341826167541004,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0.34823682632161,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0.480952921509202,0,0,0,0,0,0,0,0,0.135904206073614,0,0.203996435272644,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0.0671834724867263,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0.50313580350515,0.889811221596536,0,0,0.15543720058278,0.147855149989634,0.159296767163702,0,0,0,0.265841714557995,0,0.300515217994437,0,0.406870733204662,0.181848659202559,0,1.39210127963548,0,0.400027764663154,0.343395705182793,0,0,0.385239660814607,0,0,0.453411851024545,0.463044948647668,0.244736704506468,0.358177682162975,0,0,1.06013487567529,0.964570191354574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0.184105950251841,0,0,0,0,0,0,0,0.212574920101683,0,0,1.90802610392051,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0.690359926060101,0,0,0.40341013740704,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.342976018874837,0.135939465953663,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0.332660356546013,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:80842672..80842689,- | |||
}} | }} |
Latest revision as of 04:47, 25 July 2015
Short description: | p@chr15:80842672..80842689, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:80842672..80842689, - |
Coexpression cluster: | C3522_Fibroblast_Smooth_basal_mesenchymal_Meningeal_Ewing_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 4.07e-24 | 23 |
fibroblast | 1.81e-21 | 76 |
fibroblast of tunica adventitia of artery | 3.25e-12 | 4 |
fibroblast of the aortic adventitia | 3.25e-12 | 4 |
leptomeningeal cell | 5.45e-08 | 3 |
smooth muscle cell of the brain vasculature | 1.30e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 6.62e-21 | 41 |
integument | 2.67e-18 | 46 |
integumental system | 2.67e-18 | 46 |
artery wall | 3.25e-12 | 4 |
tunica adventitia of artery | 3.25e-12 | 4 |
adventitia | 3.25e-12 | 4 |
tunica adventitia of blood vessel | 3.25e-12 | 4 |
aorta tunica adventitia | 3.25e-12 | 4 |
aorta wall | 3.25e-12 | 4 |
surface structure | 2.25e-09 | 99 |
aorta | 4.49e-08 | 21 |
aortic system | 4.49e-08 | 21 |
blood-cerebrospinal fluid barrier | 5.45e-08 | 3 |
blood vessel layer | 3.70e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.14e-16 | 5 |
myotonic disease | 4.14e-16 | 5 |
muscle tissue disease | 4.14e-16 | 5 |
myopathy | 4.14e-16 | 5 |
muscular disease | 4.14e-16 | 5 |
myotonic dystrophy | 4.14e-16 | 5 |
peripheral nervous system neoplasm | 1.69e-07 | 3 |