FFCP PHASE1:Hg19::chr8:144417014..144417064,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116447 | |EntrezGene=116447 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29787 | |HGNC=29787 | ||
|TSSclassifier=strong | |||
|UniProt=E5RGR2,E5RJ95,E5RFE3,E5KMK7,Q969P6 | |UniProt=E5RGR2,E5RJ95,E5RFE3,E5KMK7,Q969P6 | ||
|association_with_transcript=0bp_to_ENST00000518951,ENST00000519591,ENST00000522043,ENST00000523417,NM_052963,uc003yxz.2,uc010mfb.2,uc010mfd.1_5end | |association_with_transcript=0bp_to_ENST00000518951,ENST00000519591,ENST00000522043,ENST00000523417,NM_052963,uc003yxz.2,uc010mfb.2,uc010mfd.1_5end | ||
|cluster_id=chr8:144417014..144417064,- | |||
|description=CAGE_peak_1_at_TOP1MT_5end | |description=CAGE_peak_1_at_TOP1MT_5end | ||
|id=chr8:144417014..144417064,- | |id=chr8:144417014..144417064,- | ||
|ontology_enrichment_celltype=CL:0000066!2.75e-25!254;CL:0000223!7.23e-10!59;CL:0000012!5.77e-09!682;CL:0000548!3.39e-08!679;CL:0000004!3.39e-08!679;CL:0000255!3.39e-08!679;CL:0000063!7.05e-08!578;CL:0002076!2.05e-07!43 | |ontology_enrichment_celltype=CL:0000066!2.75e-25!254;CL:0000223!7.23e-10!59;CL:0000012!5.77e-09!682;CL:0000548!3.39e-08!679;CL:0000004!3.39e-08!679;CL:0000255!3.39e-08!679;CL:0000063!7.05e-08!578;CL:0002076!2.05e-07!43 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.51e-25,253;CL:0000223,1.00e-09,58;CL:0002076,2.82e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.56e-34!235;DOID:14566!4.93e-34!239;DOID:0050687!7.30e-23!143;DOID:0050686!5.51e-19!137;DOID:305!4.31e-16!106;DOID:2531!3.15e-12!51;DOID:0060083!3.15e-12!51;DOID:3095!1.27e-10!22;DOID:2994!1.27e-10!22;DOID:1240!2.44e-10!39;DOID:8692!3.74e-10!31;DOID:299!8.75e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.20e-10;22!DOID:2994;1.20e-10;22!DOID:8692;4.94e-10;31!DOID:1240;1.45e-08;39!DOID:2531;8.36e-07;51!DOID:0060083;8.36e-07;51!DOID:299;8.95e-07;25!DOID:1749;9.85e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.55e-34,235;DOID:14566,4.91e-34,239;DOID:0050687,7.30e-23,143;DOID:0050686,5.48e-19,137;DOID:305,4.31e-16,106;DOID:2531,3.13e-12,51;DOID:0060083,3.13e-12,51;DOID:3095,1.27e-10,22;DOID:2994,1.27e-10,22;DOID:1240,2.42e-10,39;DOID:8692,3.74e-10,31;DOID:299,8.75e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0005177!1.03e-08!107;UBERON:0004119!1.59e-08!169;UBERON:0000925!1.59e-08!169;UBERON:0006595!1.59e-08!169;UBERON:0000466!1.31e-07!126;UBERON:0001007!2.27e-07!155;UBERON:0001555!2.27e-07!155;UBERON:0007026!2.27e-07!155;UBERON:0000464!2.91e-07!104;UBERON:0000077!5.92e-07!130;UBERON:0001041!8.38e-07!98 | |ontology_enrichment_uberon=UBERON:0005177!1.03e-08!107;UBERON:0004119!1.59e-08!169;UBERON:0000925!1.59e-08!169;UBERON:0006595!1.59e-08!169;UBERON:0000466!1.31e-07!126;UBERON:0001007!2.27e-07!155;UBERON:0001555!2.27e-07!155;UBERON:0007026!2.27e-07!155;UBERON:0000464!2.91e-07!104;UBERON:0000077!5.92e-07!130;UBERON:0001041!8.38e-07!98 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,3.51e-10,101 | |||
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| ||
|short_description=p1@TOP1MT | |short_description=p1@TOP1MT | ||
}} | }} |
Latest revision as of 22:08, 16 September 2015
Short description: | p1@TOP1MT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TOP1MT_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000518951, ENST00000519591, ENST00000522043, ENST00000523417, NM_052963, uc003yxz.2, uc010mfb.2, uc010mfd.1_5end |
EntrezGene: | TOP1MT |
HGNC: | 29787 |
UniProt: | E5RGR2E5RJ95E5RFE3E5KMK7Q969P6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.51e-25 | 253 |
endodermal cell | 1.00e-09 | 58 |
endo-epithelial cell | 2.82e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 3.51e-10 | 101 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.55e-34 | 235 |
disease of cellular proliferation | 4.91e-34 | 239 |
cell type cancer | 7.30e-23 | 143 |
organ system cancer | 5.48e-19 | 137 |
carcinoma | 4.31e-16 | 106 |
hematologic cancer | 3.13e-12 | 51 |
immune system cancer | 3.13e-12 | 51 |
germ cell and embryonal cancer | 1.27e-10 | 22 |
germ cell cancer | 1.27e-10 | 22 |
leukemia | 2.42e-10 | 39 |
myeloid leukemia | 3.74e-10 | 31 |
adenocarcinoma | 8.75e-07 | 25 |