FFCP PHASE1:Hg19::chr3:58200702..58200712,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1776 | |EntrezGene=1776 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2959 | |HGNC=2959 | ||
|TSSclassifier=strong | |||
|UniProt=E9PES0,Q59F48 | |UniProt=E9PES0,Q59F48 | ||
|association_with_transcript=140bp_to_ENST00000450710,uc003djq.1_5end | |association_with_transcript=140bp_to_ENST00000450710,uc003djq.1_5end | ||
|cluster_id=chr3:58200702..58200712,- | |||
|coexpression_cluster_id=C74 | |||
|description=CAGE_peak_18_at_DNASE1L3_5end | |description=CAGE_peak_18_at_DNASE1L3_5end | ||
|id=chr3:58200702..58200712,- | |id=chr3:58200702..58200712,- | ||
|ontology_enrichment_celltype=CL:0000946!4.69e-19!1;CL:0000786!4.69e-19!1;CL:0000980!4.69e-19!1;CL:0000945!5.63e-19!24;CL:0000826!5.63e-19!24;CL:0000542!3.59e-12!53;CL:0000051!3.59e-12!53;CL:0000785!3.27e-10!2;CL:0000955!3.27e-10!2;CL:0000818!3.27e-10!2;CL:0000954!3.27e-10!2;CL:0000816!3.27e-10!2;CL:0000738!8.86e-10!140;CL:0002087!3.82e-09!119;CL:0000838!8.26e-09!52;CL:0002032!3.33e-08!165;CL:0000837!3.33e-08!165;CL:0000037!7.63e-08!172;CL:0000566!7.63e-08!172;CL:0000988!2.24e-07!182;CL:0000767!2.47e-07!3;CL:0000817!3.16e-07!3;CL:0002150!3.35e-07!3;CL:0000861!3.35e-07!3;CL:0002031!9.88e-07!124 | |ontology_enrichment_celltype=CL:0000946!4.69e-19!1;CL:0000786!4.69e-19!1;CL:0000980!4.69e-19!1;CL:0000945!5.63e-19!24;CL:0000826!5.63e-19!24;CL:0000542!3.59e-12!53;CL:0000051!3.59e-12!53;CL:0000785!3.27e-10!2;CL:0000955!3.27e-10!2;CL:0000818!3.27e-10!2;CL:0000954!3.27e-10!2;CL:0000816!3.27e-10!2;CL:0000738!8.86e-10!140;CL:0002087!3.82e-09!119;CL:0000838!8.26e-09!52;CL:0002032!3.33e-08!165;CL:0000837!3.33e-08!165;CL:0000037!7.63e-08!172;CL:0000566!7.63e-08!172;CL:0000988!2.24e-07!182;CL:0000767!2.47e-07!3;CL:0000817!3.16e-07!3;CL:0002150!3.35e-07!3;CL:0000861!3.35e-07!3;CL:0002031!9.88e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000945;4.20e-12;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.20e-12,24;CL:0000826,4.20e-12,24 | |||
|ontology_enrichment_development_v019=UBERON:0004872;8.16e-11;7 | |||
|ontology_enrichment_disease=DOID:2355!1.08e-19!1;DOID:12603!3.25e-19!1;DOID:74!1.57e-10!2;DOID:0060058!2.53e-08!10 | |ontology_enrichment_disease=DOID:2355!1.08e-19!1;DOID:12603!3.25e-19!1;DOID:74!1.57e-10!2;DOID:0060058!2.53e-08!10 | ||
|ontology_enrichment_disease_v019=DOID:2355;2.39e-66;1!DOID:74;5.04e-34;2!DOID:0060058;2.08e-27;10!DOID:1287;8.69e-18;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,2.39e-66,1;DOID:74,5.04e-34,2;DOID:0060058,2.08e-27,10;DOID:1287,8.69e-18,4 | |||
|ontology_enrichment_uberon=UBERON:0006834!3.91e-19!1;UBERON:0002106!1.82e-07!3;UBERON:0004854!1.82e-07!3;UBERON:0009034!1.82e-07!3;UBERON:0002095!1.82e-07!3;UBERON:0004782!1.82e-07!3;UBERON:0003281!1.82e-07!3;UBERON:0009664!1.82e-07!3;UBERON:0002296!1.82e-07!3;UBERON:0005602!1.82e-07!3;UBERON:0001179!1.82e-07!3;UBERON:0006293!1.82e-07!3 | |ontology_enrichment_uberon=UBERON:0006834!3.91e-19!1;UBERON:0002106!1.82e-07!3;UBERON:0004854!1.82e-07!3;UBERON:0009034!1.82e-07!3;UBERON:0002095!1.82e-07!3;UBERON:0004782!1.82e-07!3;UBERON:0003281!1.82e-07!3;UBERON:0009664!1.82e-07!3;UBERON:0002296!1.82e-07!3;UBERON:0005602!1.82e-07!3;UBERON:0001179!1.82e-07!3;UBERON:0006293!1.82e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.62e-23;3!UBERON:0004177;1.40e-14;5!UBERON:0005057;1.40e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.62e-23,3;UBERON:0004854,2.62e-23,3;UBERON:0009034,2.62e-23,3;UBERON:0002095,2.62e-23,3;UBERON:0004782,2.62e-23,3;UBERON:0003281,2.62e-23,3;UBERON:0009664,2.62e-23,3;UBERON:0002296,2.62e-23,3;UBERON:0005602,2.62e-23,3;UBERON:0001179,2.62e-23,3;UBERON:0006293,2.62e-23,3;UBERON:0004177,8.16e-11,7;UBERON:0005057,8.16e-11,7;UBERON:0000945,1.24e-09,8;UBERON:0010039,1.24e-09,8;UBERON:0004457,7.48e-07,12;UBERON:0000042,7.48e-07,12;UBERON:0003887,7.48e-07,12 | |||
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|short_description=p18@DNASE1L3 | |short_description=p18@DNASE1L3 | ||
}} | }} |
Latest revision as of 05:17, 19 September 2015
Short description: | p18@DNASE1L3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_DNASE1L3_5end |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | 140bp_to_ENST00000450710, uc003djq.1_5end |
EntrezGene: | DNASE1L3 |
HGNC: | 2959 |
UniProt: | E9PES0Q59F48 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.20e-12 | 24 |
pro-B cell | 4.20e-12 | 24 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.62e-23 | 3 |
gastrointestinal system mesentery | 2.62e-23 | 3 |
stomach region | 2.62e-23 | 3 |
mesentery | 2.62e-23 | 3 |
gastrointestinal system serosa | 2.62e-23 | 3 |
mesentery of stomach | 2.62e-23 | 3 |
gut mesentery | 2.62e-23 | 3 |
dorsal mesentery | 2.62e-23 | 3 |
dorsal mesogastrium | 2.62e-23 | 3 |
peritoneal cavity | 2.62e-23 | 3 |
spleen primordium | 2.62e-23 | 3 |
hemopoietic organ | 8.16e-11 | 7 |
immune organ | 8.16e-11 | 7 |
stomach | 1.24e-09 | 8 |
food storage organ | 1.24e-09 | 8 |
cavity lining | 7.48e-07 | 12 |
serous membrane | 7.48e-07 | 12 |
intraembryonic coelom | 7.48e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
anemia | 2.39e-66 | 1 |
hematopoietic system disease | 5.04e-34 | 2 |
lymphoma | 2.08e-27 | 10 |
cardiovascular system disease | 8.69e-18 | 4 |