FFCP PHASE1:Hg19::chr4:178230985..178230997,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55247 | |EntrezGene=55247 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24573 | |HGNC=24573 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TAT5 | |UniProt=Q8TAT5 | ||
|association_with_transcript=0bp_to_ENST00000264596,NM_018248,uc003iut.2,uc010irs.2_5end | |association_with_transcript=0bp_to_ENST00000264596,NM_018248,uc003iut.2,uc010irs.2_5end | ||
|cluster_id=chr4:178230985..178230997,+ | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_3_at_NEIL3_5end | |description=CAGE_peak_3_at_NEIL3_5end | ||
|id=chr4:178230985..178230997,+ | |id=chr4:178230985..178230997,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.80e-10!254;CL:0000333!1.96e-08!41;CL:0000133!2.07e-08!59;CL:0002319!1.21e-07!25;CL:0000548!2.15e-07!679;CL:0000004!2.15e-07!679;CL:0000255!2.15e-07!679;CL:0000012!3.13e-07!682 | |ontology_enrichment_celltype=CL:0000066!3.80e-10!254;CL:0000333!1.96e-08!41;CL:0000133!2.07e-08!59;CL:0002319!1.21e-07!25;CL:0000548!2.15e-07!679;CL:0000004!2.15e-07!679;CL:0000255!2.15e-07!679;CL:0000012!3.13e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0002319;7.03e-08;25!CL:0002321;1.18e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,2.58e-11,41;CL:0000133,1.10e-09,59;CL:0002319,8.73e-08,25;CL:0000221,4.77e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.24e-47!235;DOID:14566!1.04e-45!239;DOID:0050686!1.62e-24!137;DOID:0050687!2.47e-23!143;DOID:305!6.54e-18!106;DOID:2531!5.50e-17!51;DOID:0060083!5.50e-17!51;DOID:1240!1.38e-14!39;DOID:8692!3.69e-10!31 | |ontology_enrichment_disease=DOID:162!2.24e-47!235;DOID:14566!1.04e-45!239;DOID:0050686!1.62e-24!137;DOID:0050687!2.47e-23!143;DOID:305!6.54e-18!106;DOID:2531!5.50e-17!51;DOID:0060083!5.50e-17!51;DOID:1240!1.38e-14!39;DOID:8692!3.69e-10!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;4.85e-14;39!DOID:8692;1.31e-10;31!DOID:2531;3.93e-10;51!DOID:0060083;3.93e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.36e-30,235;DOID:14566,1.00e-28,239;DOID:0050686,9.07e-19,137;DOID:1240,1.62e-17,39;DOID:2531,3.28e-16,51;DOID:0060083,3.28e-16,51;DOID:0050687,3.18e-12,143;DOID:8692,8.29e-11,31;DOID:305,8.88e-09,106 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.982935746006035,0,1.31064823278103,1.31883489114227,0.123766352960047,0,0,0,0,0,0.984968464614303,0.204000691244253,0,4.29353980696585,3.28498620174922,1.38096903554283,1.45185470921107,1.39571002064908,1.33808328233255,0,0,0,0,0.30120591877825,0,1.31694240986513,0.284338464974843,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0.557052284425868,0,0,0.270803863765016,0.640456598628376,0.520237390239513,0.822189523018381,0.829050053357545,0.289803085735052,0,0,0,0.679856056185397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0.722878304769133,0,0,0.795285947051099,0,1.03988298880475,0,0.790513071238134,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0.39752481473341,0,0.694281003215189,0,0,0,0.208994966536811,0,0.35576626268671,0.33472061276467,0.402829317109147,0,0,0,0,1.3394959242612,1.57170560838319,2.36484109014977,3.06633274931766,0,0.549605231791222,0,0,0,0,0.759783069987479,0,1.14734648299525,0.354668382198357,0,0,0,0.933633106199299,0.404132016209064,0.817309515567294,0,0,0.234321431833797,0,2.2818872861778,0.149448680551801,2.23125547423153,1.45685649931318,1.26405726032024,0.204154171254893,1.59684612505298,0.309977343527296,0,0,0,0,1.85169725349473,2.00189631795143,0.831192346452549,0.438977620880838,0,0.150238058906597,0.794025282120147,0.89694817844431,0,0.847727604638247,1.50045548042201,0.618315175430633,0.257640540045629,0,2.36286865137773,0.292311015483596,1.00973509697646,0.184099797284599,0.161646056818812,0.710019185033229,0.503760491138201,0.67824236924195,0,1.36373060295417,1.43402297694502,2.07355300420312,2.25300606146525,2.09149097165133,2.48786532036889,1.26160425437814,0.36497735907583,0,0,1.38134921352481,0,0,1.41968160047813,1.18009283054671,1.92808823906786,1.43382164552112,0.653638332277218,1.66089433377768,0.674156540800822,0.98110732562673,2.30848294167834,0,0,0.4115740113314,0,0,0,0,7.94633578946371,0.983907508344908,0.171567810298526,0,0,1.50793458617446,0.833296006426766,0,0,0,0.115930404975077,0,0.433099343283221,0.462985512576611,0.380508304469197,0.790204397959275,1.71697232418975,0.246217006087397,0,0.297262324577456,0,0.671928512795438,0,1.07470227243418,0.290633938513962,1.53353071666084,0,0.528290604079356,0,0.144119953416961,0,1.52394946301206,1.14596527667483,0,1.71072446022705,1.02827492703324,1.20137223137567,0.285826432630578,0.672786506072164,0,1.466765716419,0,0,0.845302752556,0,0,0,0,0.266422179016099,0,0,0,0.65147236858747,0,0.791951872933429,0,0,0,0,0,0,0,0,4.27910715122155,0.144781306667579,0.205476322550383,0.895304816199478,1.90544744788996,0,0,0,1.01637849688985,1.30139853857622,0.773288812777695,0.837581326671744,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0,0,0,0,0,0,0.553107505625109,0.60818530127658,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,1.07946785661859,0.355123450626254,0.821271560138091,1.03850885836724,0.348631135379878,1.45031339509947,0.200506470303285,0,1.03333003348146,0.910455840033585,0.131124414959424,0.902399225814824,0.693138033939733,0.784349769176855,0,0.949964660035881,1.13733384070897,1.19065593693561,1.0795795805107,0,0,0,0.509752546090077,0.831076008928724,0.223874754722178,8.77039506583738,7.32019262869721,0.769350375349168,0,0.325378394664303,0,2.28923662045859,2.22775649785588,0,0,0,0.096670718292122,0.924291702687866,1.38153307253517,1.51620229732984,0.859361958946189,0.580066775656914,0.852266274161009,0.445160178233687,0,0.192190067365106,1.27612712494584,0,0.464845549297286,0,0,0.308033580176089,0,0,0.18532421910392,0.858749320451947,0.372158369359667,0.316379424718726,0.190630193923825,0.511795582622668,0,0,0,0,1.09814811894422,0.824686816419805,0.404364963146632,0,0,0,0,0,0.545999645631943,0,0,0.551365343546124,0.66343897524122,0,0,0,0,0.6196469961995,0.281695602532241,2.00775893085672,0.196498082026242,0.35667105148125,1.77380532035299,0,0,0.75894634753143,0.349934720244983,0.48111056362756,0,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,1.06824071127473,0,2.69544237579135,2.04383492638291,1.87549976869378,6.47390774470568,4.46393563640703,1.1974762285969,0.766021480529467,1.2700414963433,0,0.842391534340376,1.59764275323235,0.783399478865116,2.50634477090067,0.338583555603207,2.24823305145179,2.01799707191048,1.70338495076131,0.687010689511529,3.99412993600995,2.68411329470899,3.00328455081435,1.9538809540204,1.39203086947621,1.23087398947712,0.540911356951966,1.6653598399891,0,0.935702702041099,0.146508179271894,1.09224469574562,2.45175445410452,1.13654458722565,0,1.18785872333055,0,0,0.140669416410513,0.111308705022906,0.329607748453519,1.47787785689595,0,0.276283915531148,1.51159648712566,1.1249555075237,0.246169610922139,0.311039587661807,1.61763032065188,0.179021174675609,1.02314474045374,0,0,2.22273980289274,0,0,0,0,0.349839999984783,0,0.341380344856499,0.254253650292766,1.654713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| ||
|short_description=p3@NEIL3 | |short_description=p3@NEIL3 | ||
}} | }} |
Latest revision as of 22:53, 16 September 2015
Short description: | p3@NEIL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NEIL3_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000264596, NM_018248, uc003iut.2, uc010irs.2_5end |
EntrezGene: | NEIL3 |
HGNC: | 24573 |
UniProt: | Q8TAT5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 2.58e-11 | 41 |
neurectodermal cell | 1.10e-09 | 59 |
neural cell | 8.73e-08 | 25 |
ectodermal cell | 4.77e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.36e-30 | 235 |
disease of cellular proliferation | 1.00e-28 | 239 |
organ system cancer | 9.07e-19 | 137 |
leukemia | 1.62e-17 | 39 |
hematologic cancer | 3.28e-16 | 51 |
immune system cancer | 3.28e-16 | 51 |
cell type cancer | 3.18e-12 | 143 |
myeloid leukemia | 8.29e-11 | 31 |
carcinoma | 8.88e-09 | 106 |