FFCP PHASE1:Hg19::chr9:140011704..140011710,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:140011704..140011710,+ | |||
|coexpression_cluster_id=C83 | |||
|description=CAGE_peak_at_chr9:140011704..140011710,+ | |description=CAGE_peak_at_chr9:140011704..140011710,+ | ||
|id=chr9:140011704..140011710,+ | |id=chr9:140011704..140011710,+ | ||
|ontology_enrichment_celltype=CL:0000223!9.28e-12!59;CL:0002541!3.99e-09!3;CL:0000039!2.52e-08!7;CL:0000586!2.52e-08!7;CL:0002563!5.46e-07!4;CL:0000083!6.51e-07!4;CL:0000946!7.29e-07!1;CL:0000786!7.29e-07!1;CL:0000980!7.29e-07!1;CL:0002336!7.73e-07!1;CL:0002261!7.73e-07!1;CL:0002170!7.73e-07!1;CL:0002251!9.71e-07!21;CL:1001319!9.73e-07!1;CL:1000600!9.73e-07!1 | |ontology_enrichment_celltype=CL:0000223!9.28e-12!59;CL:0002541!3.99e-09!3;CL:0000039!2.52e-08!7;CL:0000586!2.52e-08!7;CL:0002563!5.46e-07!4;CL:0000083!6.51e-07!4;CL:0000946!7.29e-07!1;CL:0000786!7.29e-07!1;CL:0000980!7.29e-07!1;CL:0002336!7.73e-07!1;CL:0002261!7.73e-07!1;CL:0002170!7.73e-07!1;CL:0002251!9.71e-07!21;CL:1001319!9.73e-07!1;CL:1000600!9.73e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002253;7.14e-26;2!CL:0002541;9.45e-18;3!CL:0000083;1.13e-13;4!CL:0002563;1.13e-13;4!CL:0000039;1.89e-08;7!CL:0000586;1.89e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,7.14e-26,2;CL:0002541,1.12e-17,3;CL:0000083,1.00e-13,4;CL:0002563,1.13e-13,4;CL:0000039,1.89e-08,7;CL:0000586,1.89e-08,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!8.07e-12!143;DOID:305!2.17e-10!106;DOID:4556!1.19e-08!3;DOID:162!5.16e-08!235;DOID:14566!9.47e-08!239;DOID:1799!1.55e-07!1;DOID:10165!1.55e-07!1;DOID:1798!1.55e-07!1;DOID:1793!6.51e-07!4;DOID:3119!8.85e-07!14;DOID:2355!9.18e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1799;3.99e-50;1!DOID:10165;3.99e-50;1!DOID:1798;3.99e-50;1!DOID:1793;1.13e-13;4!DOID:170;1.44e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.42e-50,1;DOID:10165,2.42e-50,1;DOID:1798,2.42e-50,1;DOID:1793,1.00e-13,4;DOID:170,1.32e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0003124!8.62e-14!7;UBERON:0000344!6.78e-12!12;UBERON:0003350!4.07e-11!5;UBERON:0000476!3.99e-09!3;UBERON:0000920!3.99e-09!3;UBERON:0004923!1.79e-08!57;UBERON:0004119!3.95e-08!169;UBERON:0000925!3.95e-08!169;UBERON:0006595!3.95e-08!169;UBERON:0000077!6.01e-08!130;UBERON:0004913!5.45e-07!1;UBERON:0003703!5.45e-07!1;UBERON:0001174!5.45e-07!1;UBERON:0004914!5.45e-07!1;UBERON:0001242!5.46e-07!4;UBERON:0001262!5.46e-07!4;UBERON:0004786!5.46e-07!4;UBERON:0004808!5.46e-07!4;UBERON:0001277!5.46e-07!4;UBERON:0005631!6.18e-07!14;UBERON:0000158!6.18e-07!14;UBERON:0004921!7.31e-07!129;UBERON:0004185!7.31e-07!129;UBERON:0004645!9.73e-07!1;UBERON:0001256!9.73e-07!1;UBERON:0001259!9.73e-07!1 | |ontology_enrichment_uberon=UBERON:0003124!8.62e-14!7;UBERON:0000344!6.78e-12!12;UBERON:0003350!4.07e-11!5;UBERON:0000476!3.99e-09!3;UBERON:0000920!3.99e-09!3;UBERON:0004923!1.79e-08!57;UBERON:0004119!3.95e-08!169;UBERON:0000925!3.95e-08!169;UBERON:0006595!3.95e-08!169;UBERON:0000077!6.01e-08!130;UBERON:0004913!5.45e-07!1;UBERON:0003703!5.45e-07!1;UBERON:0001174!5.45e-07!1;UBERON:0004914!5.45e-07!1;UBERON:0001242!5.46e-07!4;UBERON:0001262!5.46e-07!4;UBERON:0004786!5.46e-07!4;UBERON:0004808!5.46e-07!4;UBERON:0001277!5.46e-07!4;UBERON:0005631!6.18e-07!14;UBERON:0000158!6.18e-07!14;UBERON:0004921!7.31e-07!129;UBERON:0004185!7.31e-07!129;UBERON:0004645!9.73e-07!1;UBERON:0001256!9.73e-07!1;UBERON:0001259!9.73e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;9.45e-18;3!UBERON:0000920;9.45e-18;3!UBERON:0001052;1.13e-13;4!UBERON:0001242;1.13e-13;4!UBERON:0001262;1.13e-13;4!UBERON:0004786;1.13e-13;4!UBERON:0004808;1.13e-13;4!UBERON:0001277;1.13e-13;4!UBERON:0004907;3.26e-11;5!UBERON:0000485;2.18e-08;7!UBERON:0003929;2.18e-08;7!UBERON:0003350;1.69e-07;8!UBERON:0001155;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.12e-17,3;UBERON:0001052,1.13e-13,4;UBERON:0001242,1.13e-13,4;UBERON:0001262,1.13e-13,4;UBERON:0004786,1.13e-13,4;UBERON:0004808,1.13e-13,4;UBERON:0001277,1.13e-13,4;UBERON:0004907,3.26e-11,5;UBERON:0003124,2.35e-08,7;UBERON:0003350,1.69e-07,8;UBERON:0001155,8.37e-07,9;UBERON:0000485,8.37e-07,9 | |||
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|short_description=p@chr9:140011704..140011710,+ | |short_description=p@chr9:140011704..140011710,+ | ||
}} | }} |
Latest revision as of 00:36, 1 August 2015
Short description: | p@chr9:140011704..140011710, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:140011704..140011710, + |
Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 7.14e-26 | 2 |
chorionic membrane mesenchymal stem cell | 1.12e-17 | 3 |
epithelial cell of pancreas | 1.00e-13 | 4 |
intestinal epithelial cell | 1.13e-13 | 4 |
germ line cell | 1.89e-08 | 7 |
germ cell | 1.89e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.12e-17 | 3 |
rectum | 1.13e-13 | 4 |
intestinal mucosa | 1.13e-13 | 4 |
wall of intestine | 1.13e-13 | 4 |
gastrointestinal system mucosa | 1.13e-13 | 4 |
gastrointestinal system epithelium | 1.13e-13 | 4 |
intestinal epithelium | 1.13e-13 | 4 |
lower digestive tract | 3.26e-11 | 5 |
chorion | 2.35e-08 | 7 |
epithelium of mucosa | 1.69e-07 | 8 |
colon | 8.37e-07 | 9 |
simple columnar epithelium | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.42e-50 | 1 |
endocrine pancreas cancer | 2.42e-50 | 1 |
pancreatic endocrine carcinoma | 2.42e-50 | 1 |
pancreatic cancer | 1.00e-13 | 4 |
endocrine gland cancer | 1.32e-09 | 6 |