FFCP PHASE1:Hg19::chr9:16727978..16728010,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54796 | |EntrezGene=54796 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30988 | |HGNC=30988 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000418777,ENST00000468187_5end | |association_with_transcript=0bp_to_ENST00000418777,ENST00000468187_5end | ||
|cluster_id=chr9:16727978..16728010,- | |||
|description=CAGE_peak_6_at_BNC2_5end | |description=CAGE_peak_6_at_BNC2_5end | ||
|id=chr9:16727978..16728010,- | |id=chr9:16727978..16728010,- | ||
|ontology_enrichment_celltype=CL:0000055!3.17e-18!180;CL:0000680!1.86e-10!57;CL:0000056!1.86e-10!57;CL:0000355!1.86e-10!57;CL:0000187!1.04e-09!54;CL:0000393!1.14e-09!60;CL:0000211!1.14e-09!60;CL:0000183!2.59e-08!59;CL:0000222!8.32e-08!119 | |ontology_enrichment_celltype=CL:0000055!3.17e-18!180;CL:0000680!1.86e-10!57;CL:0000056!1.86e-10!57;CL:0000355!1.86e-10!57;CL:0000187!1.04e-09!54;CL:0000393!1.14e-09!60;CL:0000211!1.14e-09!60;CL:0000183!2.59e-08!59;CL:0000222!8.32e-08!119 | ||
|ontology_enrichment_celltype_v019=CL:1000306;5.61e-09;4!CL:0002547;5.61e-09;4!CL:0000188;4.40e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,1.04e-08,4;CL:0002547,1.04e-08,4;CL:0000188,4.49e-08,9;CL:0000680,1.05e-07,58;CL:0000056,1.05e-07,58;CL:0000355,1.05e-07,58;CL:0000187,1.85e-07,55;CL:0000064,7.75e-07,3;CL:0000067,7.75e-07,3;CL:0005012,7.75e-07,3;CL:0002304,7.75e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!8.11e-12!63;UBERON:0001015!8.11e-12!63;UBERON:0000383!8.11e-12!63;UBERON:0001134!3.98e-11!61;UBERON:0002036!3.98e-11!61;UBERON:0003082!3.98e-11!61;UBERON:0004290!4.26e-10!70;UBERON:0000486!5.95e-09!82;UBERON:0000914!8.81e-09!83;UBERON:0002329!8.81e-09!83;UBERON:0003077!8.81e-09!83;UBERON:0003059!8.81e-09!83;UBERON:0007282!8.81e-09!83;UBERON:0009618!8.81e-09!83;UBERON:0007285!8.81e-09!83 | |ontology_enrichment_uberon=UBERON:0002385!8.11e-12!63;UBERON:0001015!8.11e-12!63;UBERON:0000383!8.11e-12!63;UBERON:0001134!3.98e-11!61;UBERON:0002036!3.98e-11!61;UBERON:0003082!3.98e-11!61;UBERON:0004290!4.26e-10!70;UBERON:0000486!5.95e-09!82;UBERON:0000914!8.81e-09!83;UBERON:0002329!8.81e-09!83;UBERON:0003077!8.81e-09!83;UBERON:0003059!8.81e-09!83;UBERON:0007282!8.81e-09!83;UBERON:0009618!8.81e-09!83;UBERON:0007285!8.81e-09!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;5.61e-09;4!UBERON:0000415;5.61e-09;4!UBERON:0007240;5.61e-09;4!UBERON:0005742;5.61e-09;4!UBERON:0005734;5.61e-09;4!UBERON:0004664;5.61e-09;4!UBERON:0004663;5.61e-09;4!UBERON:0006876;3.02e-08;11!UBERON:0001134;4.31e-07;16!UBERON:0002036;4.31e-07;16!UBERON:0005284;4.69e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,1.04e-08,4;UBERON:0007240,1.04e-08,4;UBERON:0005742,1.04e-08,4;UBERON:0005734,1.04e-08,4;UBERON:0004664,1.04e-08,4;UBERON:0004663,1.04e-08,4;UBERON:0006876,2.08e-08,11;UBERON:0002385,2.26e-08,64;UBERON:0001015,2.26e-08,64;UBERON:0000383,2.26e-08,64;UBERON:0001134,8.71e-08,62;UBERON:0002036,8.71e-08,62;UBERON:0003082,8.71e-08,62;UBERON:0004797,1.73e-07,7;UBERON:0005284,5.81e-07,5;UBERON:0001778,7.75e-07,3;UBERON:0001775,7.75e-07,3 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.422863212287913,0,0,0.872338524100369,0,0,0,0,0,0,0.263766978228454,1.60896258848061,0.994192127183747,0,0,0.730310090387373,0,1.47745269692145,0.816002764977012,2.82109249330279,0.572471974262113,0,0,1.60468152070698,1.23150884174919,1.18066171970519,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,1.34140171940727,0.895037932904712,0.722878304769133,1.00267582127178,0.289693037921647,0.795285947051099,0,1.98523116044542,1.10864698731282,1.93236528524877,1.30979075497713,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0.496971951695318,1.2663051166458,2.38336525463794,4.58938593198102,1.06400514659507,0,0,0,1.8672662123986,0,0,1.05950199351452,2.88087962239999,0,0,0.570471821544449,0.448346041655403,0.117434498643765,0,0,0.61246251376468,0.122834317311768,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0.567160915800105,0.717558542755448,0.213557388818567,1.05965950579781,0.600182192168805,0.515262646192195,0,0.18611685633159,0.168776332241266,0,2.27190396819703,0.460249493211497,0.80823028409406,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0.310983165046111,0.252320850875628,1.82488679537915,0,0.643240938192885,0,0.928735856063958,0.721879481669586,0.473227200159376,0.337169380156203,0.241011029883482,0.110293972732394,0.217879444092406,0.237270619111097,0.269662616320329,0,0,0,0,1.6462960453256,0,0,0,0,0,0,0.514703430895577,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.115930404975077,1.05667824812239,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.507983154337352,0,0,1.71072446022705,1.13110241973656,0.300343057843917,1.42913216315289,0.336393253036082,1.74384027533312,0.80672114403045,1.16344544182,0,0,0.531876233169741,0,0.514414748524284,0,0.532844358032199,0.285955987316295,0,0,0,0.710783897485092,0.791951872933429,2.1100756394171,1.74306691720059,2.19940580600526,0,0,0,0,0,0,0.144781306667579,1.02738161275192,0.358121926479791,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,2.82190430954022,0.500170521059677,1.08506009479894,0,0.356857977594324,0.315404830067869,0.937131319941706,0.902838299183157,2.27407504055985,0,0.664225598535437,0.368738337083406,0.347534457872331,0,0,0,0,0,0,0,0,0,1.2276957863045,1.12264037773229,0.640695746278505,0.511707249066704,0.482561763430822,1.48418066444991,0.462629081407967,0.177561725313127,0.98552587216571,0.519254429183621,0,0,0,0,0.459257792658427,0.364182336013434,0.393373244878272,0,0,0,0,0.105551628892876,0,0,0.431831832204279,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0,0.650756789328606,0.206082023295445,0,0,0,0,3.21367859688319,1.45006077438183,1.3864375540318,1.5350367472613,0.137836572484531,2.0409846524972,2.0302337147992,0.852266274161009,4.09547363974992,0,0,0,0,0,1.25924938732256,0,0.308033580176089,0,0,0,0.572499546967965,2.232950216158,1.58189712359363,0.953150969619124,0.511795582622668,2.1396949401696,1.27281299170375,0,0.539617372749944,1.37268514868027,0.706874414074119,0.404364963146632,0,0.421258456238981,0.48763373908959,0.487426979262569,1.05650146756755,0.136499911407986,0.565621727814851,2.26016233240486,0.551365343546124,0.66343897524122,0.438450885253763,1.15755106853338,0,0.202910376962704,0,0,0.430234056612155,0.589494246078727,0,1.06428319221179,0.422215270595328,0.658589785919804,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0.36408156524854,0,0,0.23874448473769,0,0,0,0.140669416410513,1.22439575525196,0,10.5562704063997,0.796991953004279,1.10513566212459,0,0.306806047506464,0,0,0.0898683511473268,0,0,0.789147245095469,0,3.33410970433911,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,7.46587478213157,0,0,0,0,0,0,0.32681539055697,0,3.77056266668606,0.455768223388005,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0.163232808159148,0,0,0,0.442287822516696,0.611030144933625,0.296521128680622,0,0,0,0.802577647298789,0,0,0,0.242780379534093,0,0,0,6.44503112210577,0,0,0,0,0,0,0,0.138674673013139,0.347119476670262,0,0,1.39781334593624,0.171986032471617,0.0967563312890851,0,0.0821154570532092,0.0969890164884194,0,0.451961481561065,0.137041924646751,0,0.126621591911757,0,0.320635281006135,0.640358984218058,0,0,0,0,0,0.124252535565433,0,0.67952103036807,0.313808538937,0,1.73370353940911,0,0,0,1.71906176567983,0,0,0.229160424011684,2.15361907373044,0,0,0,0.268733889946905,0.360299883542404,0,0,0,0,0,0.677386656526276,0,0,0.321506296930038,0.412618309791701,0.415440338029185,0,0,0,0,1.26089131678717,0.629455057619977,0,0.179287339332845,0,0,0,0.25426853765475,0,0.864221491201268,0,0,0,1.5334921960688,0.1133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| ||
|short_description=p6@BNC2 | |short_description=p6@BNC2 | ||
}} | }} |
Latest revision as of 20:06, 16 September 2015
Short description: | p6@BNC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_BNC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000418777, ENST00000468187_5end |
EntrezGene: | BNC2 |
HGNC: | 30988 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 1.04e-08 | 4 |
fibroblast of the aortic adventitia | 1.04e-08 | 4 |
cell of skeletal muscle | 4.49e-08 | 9 |
muscle precursor cell | 1.05e-07 | 58 |
myoblast | 1.05e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.05e-07 | 58 |
muscle cell | 1.85e-07 | 55 |
ciliated cell | 7.75e-07 | 3 |
ciliated epithelial cell | 7.75e-07 | 3 |
multi-ciliated epithelial cell | 7.75e-07 | 3 |
non-pigmented ciliary epithelial cell | 7.75e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
artery wall | 1.04e-08 | 4 |
tunica adventitia of artery | 1.04e-08 | 4 |
adventitia | 1.04e-08 | 4 |
tunica adventitia of blood vessel | 1.04e-08 | 4 |
aorta tunica adventitia | 1.04e-08 | 4 |
aorta wall | 1.04e-08 | 4 |
vasculature of organ | 2.08e-08 | 11 |
muscle tissue | 2.26e-08 | 64 |
musculature | 2.26e-08 | 64 |
musculature of body | 2.26e-08 | 64 |
skeletal muscle tissue | 8.71e-08 | 62 |
striated muscle tissue | 8.71e-08 | 62 |
myotome | 8.71e-08 | 62 |
blood vessel layer | 1.73e-07 | 7 |
brain vasculature | 5.81e-07 | 5 |
ciliary epithelium | 7.75e-07 | 3 |
ciliary body | 7.75e-07 | 3 |