FFCP PHASE1:Hg19::chrX:106198807..106198826,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:106198807..106198826,- | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_at_chrX:106198807..106198826,- | |description=CAGE_peak_at_chrX:106198807..106198826,- | ||
|id=chrX:106198807..106198826,- | |id=chrX:106198807..106198826,- | ||
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|ontology_enrichment_celltype_v019=CL:0000064;2.59e-117;3!CL:0000067;2.59e-117;3!CL:0005012;2.59e-117;3!CL:0002304;2.59e-117;3!CL:0000342;9.91e-41;1!CL:0002565;9.91e-41;1!CL:0000710;1.60e-18;20!CL:0000075;5.92e-14;27!CL:0002077;2.28e-11;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,2.59e-117,3;CL:0000067,2.59e-117,3;CL:0005012,2.59e-117,3;CL:0002304,2.59e-117,3;CL:0000342,9.91e-41,1;CL:0002565,9.91e-41,1;CL:0000710,1.60e-18,20;CL:0000075,5.92e-14,27;CL:0002077,2.96e-11,34;CL:0000133,4.65e-11,59;CL:0000221,3.13e-09,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3620!1.73e-10!1;DOID:3565!1.73e-10!1;DOID:5662!2.74e-10!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chrX:106198807..106198826,- | |short_description=p@chrX:106198807..106198826,- | ||
}} | }} |
Latest revision as of 04:50, 1 August 2015
Short description: | p@chrX:106198807..106198826, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:106198807..106198826, - |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 2.59e-117 | 3 |
ciliated epithelial cell | 2.59e-117 | 3 |
multi-ciliated epithelial cell | 2.59e-117 | 3 |
non-pigmented ciliary epithelial cell | 2.59e-117 | 3 |
pigment cell (sensu Vertebrata) | 9.91e-41 | 1 |
iris pigment epithelial cell | 9.91e-41 | 1 |
neurecto-epithelial cell | 1.60e-18 | 20 |
columnar/cuboidal epithelial cell | 5.92e-14 | 27 |
ecto-epithelial cell | 2.96e-11 | 34 |
neurectodermal cell | 4.65e-11 | 59 |
ectodermal cell | 3.13e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
atypical epithelium | 3.35e-156 | 4 |
ciliary epithelium | 2.59e-117 | 3 |
ciliary body | 2.59e-117 | 3 |
vasculature of eye | 1.51e-104 | 6 |
uvea | 1.51e-104 | 6 |
vasculature of head | 1.51e-104 | 6 |
pigment epithelium of eye | 1.55e-57 | 11 |
vasculature of organ | 1.55e-57 | 11 |
anterior segment of eyeball | 1.98e-45 | 14 |
iris epithelium | 9.91e-41 | 1 |
iris | 9.91e-41 | 1 |
camera-type eye | 4.31e-32 | 20 |
simple eye | 4.31e-32 | 20 |
immature eye | 4.31e-32 | 20 |
ocular region | 4.31e-32 | 20 |
eyeball of camera-type eye | 4.31e-32 | 20 |
optic cup | 4.31e-32 | 20 |
optic vesicle | 4.31e-32 | 20 |
eye primordium | 4.31e-32 | 20 |
eye | 1.31e-30 | 21 |
visual system | 1.31e-30 | 21 |
face | 2.94e-29 | 22 |
sense organ | 6.78e-27 | 24 |
sensory system | 6.78e-27 | 24 |
entire sense organ system | 6.78e-27 | 24 |
ectodermal placode | 5.13e-21 | 31 |
subdivision of head | 1.40e-13 | 49 |
head | 5.68e-12 | 56 |
anterior region of body | 7.02e-11 | 62 |
craniocervical region | 7.02e-11 | 62 |
pre-chordal neural plate | 7.02e-11 | 61 |
vasculature | 8.84e-09 | 78 |
vascular system | 8.84e-09 | 78 |
neural plate | 2.75e-08 | 82 |
presumptive neural plate | 2.75e-08 | 82 |
neurectoderm | 6.20e-08 | 86 |