FFCP PHASE1:Hg19::chr5:125695783..125695793,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65983 | |EntrezGene=65983 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24911 | |HGNC=24911 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z6D8,Q96HH9 | |UniProt=B7Z6D8,Q96HH9 | ||
|association_with_transcript=0bp_to_NM_001146319,uc011cwt.1_5end | |association_with_transcript=0bp_to_NM_001146319,uc011cwt.1_5end | ||
|cluster_id=chr5:125695783..125695793,+ | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_24_at_GRAMD3_5end | |description=CAGE_peak_24_at_GRAMD3_5end | ||
|id=chr5:125695783..125695793,+ | |id=chr5:125695783..125695793,+ | ||
|ontology_enrichment_celltype=CL:0002541!6.35e-25!3;CL:0000197!3.96e-12!6;CL:0000098!3.96e-12!6;CL:0002167!3.96e-12!6;CL:0000864!4.91e-09!1;CL:0000091!4.91e-09!1 | |ontology_enrichment_celltype=CL:0002541!6.35e-25!3;CL:0000197!3.96e-12!6;CL:0000098!3.96e-12!6;CL:0002167!3.96e-12!6;CL:0000864!4.91e-09!1;CL:0000091!4.91e-09!1 | ||
|ontology_enrichment_celltype_v019=CL:0002541;8.86e-75;3!CL:0000349;2.51e-21;19!CL:0000723;7.06e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,6.07e-75,3;CL:0000349,2.32e-21,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.78e-26;1 | |||
|ontology_enrichment_disease=DOID:3571!4.91e-09!1;DOID:3371!7.85e-09!1;DOID:4549!7.85e-09!1;DOID:5861!7.85e-09!1;DOID:6496!7.85e-09!1 | |ontology_enrichment_disease=DOID:3571!4.91e-09!1;DOID:3371!7.85e-09!1;DOID:4549!7.85e-09!1;DOID:5861!7.85e-09!1;DOID:6496!7.85e-09!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!6.35e-25!3;UBERON:0000920!6.35e-25!3;UBERON:0005631!4.56e-20!14;UBERON:0000158!4.56e-20!14;UBERON:0003124!9.65e-19!7;UBERON:0000478!1.67e-11!24;UBERON:0001282!1.07e-08!1;UBERON:0009842!1.07e-08!1;UBERON:0003704!1.07e-08!1;UBERON:0001171!1.07e-08!1;UBERON:0001172!1.07e-08!1;UBERON:0001882!1.16e-08!1;UBERON:0005403!1.16e-08!1;UBERON:0001280!1.83e-08!4;UBERON:0004647!1.83e-08!4 | |ontology_enrichment_uberon=UBERON:0000476!6.35e-25!3;UBERON:0000920!6.35e-25!3;UBERON:0005631!4.56e-20!14;UBERON:0000158!4.56e-20!14;UBERON:0003124!9.65e-19!7;UBERON:0000478!1.67e-11!24;UBERON:0001282!1.07e-08!1;UBERON:0009842!1.07e-08!1;UBERON:0003704!1.07e-08!1;UBERON:0001171!1.07e-08!1;UBERON:0001172!1.07e-08!1;UBERON:0001882!1.16e-08!1;UBERON:0005403!1.16e-08!1;UBERON:0001280!1.83e-08!4;UBERON:0004647!1.83e-08!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;8.86e-75;3!UBERON:0000920;8.86e-75;3!UBERON:0005631;6.11e-40;10!UBERON:0000158;6.11e-40;10!UBERON:0000478;4.34e-26;24!UBERON:0001987;1.40e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,6.07e-75,3;UBERON:0003124,4.46e-57,7;UBERON:0005631,2.14e-44,14;UBERON:0000158,2.14e-44,14;UBERON:0000478,4.23e-26,24;UBERON:0004923,1.11e-09,66;UBERON:0001987,1.49e-07,4;UBERON:0004340,1.49e-07,4 | |||
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|short_description=p24@GRAMD3 | |short_description=p24@GRAMD3 | ||
}} | }} |
Latest revision as of 00:59, 20 September 2015
Short description: | p24@GRAMD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_GRAMD3_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 0bp_to_NM_001146319, uc011cwt.1_5end |
EntrezGene: | GRAMD3 |
HGNC: | 24911 |
UniProt: | B7Z6D8Q96HH9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 6.07e-75 | 3 |
extraembryonic cell | 2.32e-21 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 6.07e-75 | 3 |
chorion | 4.46e-57 | 7 |
extraembryonic membrane | 2.14e-44 | 14 |
membranous layer | 2.14e-44 | 14 |
extraembryonic structure | 4.23e-26 | 24 |
organ component layer | 1.11e-09 | 66 |
placenta | 1.49e-07 | 4 |
allantois | 1.49e-07 | 4 |