FFCP PHASE1:Hg19::chrX:48380185..48380201,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10682 | |EntrezGene=10682 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3133 | |HGNC=3133 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000276096,ENST00000498425_5end | |association_with_transcript=0bp_to_ENST00000276096,ENST00000498425_5end | ||
|cluster_id=chrX:48380185..48380201,+ | |||
|description=CAGE_peak_3_at_EBP_5end | |description=CAGE_peak_3_at_EBP_5end | ||
|id=chrX:48380185..48380201,+ | |id=chrX:48380185..48380201,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.51e-14!254;CL:1000449!1.70e-07!16;CL:1000497!3.79e-07!18;CL:0002518!3.79e-07!18 | |ontology_enrichment_celltype=CL:0000066!1.51e-14!254;CL:1000449!1.70e-07!16;CL:1000497!3.79e-07!18;CL:0002518!3.79e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:1000449;1.20e-07;15!CL:1000497;2.71e-07;17!CL:0002518;2.71e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.65e-14,253;CL:1000449,1.19e-07,15;CL:1000497,2.94e-07,17;CL:0002518,2.94e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.60e-22!235;DOID:14566!1.05e-20!239;DOID:0050687!2.09e-14!143;DOID:305!1.25e-10!106;DOID:0050686!4.38e-09!137;DOID:2531!1.66e-08!51;DOID:0060083!1.66e-08!51;DOID:1240!4.03e-07!39;DOID:3095!4.13e-07!22;DOID:2994!4.13e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.66e-07;22!DOID:2994;2.66e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.53e-22,235;DOID:14566,1.01e-20,239;DOID:0050687,2.00e-14,143;DOID:305,1.20e-10,106;DOID:0050686,4.25e-09,137;DOID:2531,1.66e-08,51;DOID:0060083,1.66e-08,51;DOID:1240,4.03e-07,39;DOID:3095,4.13e-07,22;DOID:2994,4.13e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0005177!3.27e-08!107;UBERON:0001851!1.69e-07!16;UBERON:0004211!1.70e-07!16;UBERON:0001285!1.70e-07!16;UBERON:0007684!1.70e-07!16;UBERON:0003220!1.70e-07!16;UBERON:0004208!1.70e-07!16;UBERON:0001041!8.48e-07!98 | |ontology_enrichment_uberon=UBERON:0005177!3.27e-08!107;UBERON:0001851!1.69e-07!16;UBERON:0004211!1.70e-07!16;UBERON:0001285!1.70e-07!16;UBERON:0007684!1.70e-07!16;UBERON:0003220!1.70e-07!16;UBERON:0004208!1.70e-07!16;UBERON:0001041!8.48e-07!98 | ||
|ontology_enrichment_uberon_v019=UBERON:0001851;1.18e-07;15!UBERON:0006555;1.20e-07;15!UBERON:0004819;1.20e-07;15!UBERON:0001285;1.20e-07;15!UBERON:0007684;1.20e-07;15!UBERON:0002113;1.71e-07;24!UBERON:0011143;1.71e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,6.62e-09,101;UBERON:0001851,1.19e-07,15;UBERON:0004211,1.19e-07,15;UBERON:0009773,1.19e-07,15;UBERON:0001231,1.19e-07,15;UBERON:0001285,1.19e-07,15;UBERON:0007684,1.19e-07,15;UBERON:0004208,1.19e-07,15 | |||
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| ||
|short_description=p3@EBP | |short_description=p3@EBP | ||
}} | }} |
Latest revision as of 19:03, 15 September 2015
Short description: | p3@EBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EBP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000276096, ENST00000498425_5end |
EntrezGene: | EBP |
HGNC: | 3133 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.65e-14 | 253 |
epithelial cell of nephron | 1.19e-07 | 15 |
kidney cell | 2.94e-07 | 17 |
kidney epithelial cell | 2.94e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 6.62e-09 | 101 |
cortex | 1.19e-07 | 15 |
nephron epithelium | 1.19e-07 | 15 |
renal tubule | 1.19e-07 | 15 |
nephron tubule | 1.19e-07 | 15 |
nephron | 1.19e-07 | 15 |
uriniferous tubule | 1.19e-07 | 15 |
nephrogenic mesenchyme | 1.19e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.53e-22 | 235 |
disease of cellular proliferation | 1.01e-20 | 239 |
cell type cancer | 2.00e-14 | 143 |
carcinoma | 1.20e-10 | 106 |
organ system cancer | 4.25e-09 | 137 |
hematologic cancer | 1.66e-08 | 51 |
immune system cancer | 1.66e-08 | 51 |
leukemia | 4.03e-07 | 39 |
germ cell and embryonal cancer | 4.13e-07 | 22 |
germ cell cancer | 4.13e-07 | 22 |