FFCP PHASE1:Hg19::chr5:170176045..170176055,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:170176045..170176055,- | |||
|coexpression_cluster_id=C1264 | |||
|description=CAGE_peak_at_chr5:170176045..170176055,- | |description=CAGE_peak_at_chr5:170176045..170176055,- | ||
|id=chr5:170176045..170176055,- | |id=chr5:170176045..170176055,- | ||
|ontology_enrichment_celltype=CL:0000349!2.64e-50!3;CL:0002577!2.64e-50!3;CL:0002536!1.56e-34!2;CL:0000062!6.54e-07!11;CL:0000375!6.54e-07!11;CL:0000335!6.54e-07!11 | |ontology_enrichment_celltype=CL:0000349!2.64e-50!3;CL:0002577!2.64e-50!3;CL:0002536!1.56e-34!2;CL:0000062!6.54e-07!11;CL:0000375!6.54e-07!11;CL:0000335!6.54e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0002577;3.49e-84;3!CL:0002536;1.74e-57;2!CL:0000349;1.68e-53;19!CL:0002537;4.93e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,3.03e-84,3;CL:0002536,2.02e-57,2;CL:0000349,1.61e-53,19;CL:0002537,4.79e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.01e-42!14;UBERON:0000158!1.01e-42!14;UBERON:0001987!5.93e-38!4;UBERON:0004340!5.93e-38!4;UBERON:0000478!6.34e-25!24;UBERON:0000305!2.59e-22!7;UBERON:0003124!4.93e-22!7;UBERON:0004871!1.29e-19!8;UBERON:0004923!2.06e-10!57;UBERON:0000995!9.29e-08!21;UBERON:0005795!1.98e-07!22;UBERON:0003975!1.98e-07!22 | |ontology_enrichment_uberon=UBERON:0005631!1.01e-42!14;UBERON:0000158!1.01e-42!14;UBERON:0001987!5.93e-38!4;UBERON:0004340!5.93e-38!4;UBERON:0000478!6.34e-25!24;UBERON:0000305!2.59e-22!7;UBERON:0003124!4.93e-22!7;UBERON:0004871!1.29e-19!8;UBERON:0004923!2.06e-10!57;UBERON:0000995!9.29e-08!21;UBERON:0005795!1.98e-07!22;UBERON:0003975!1.98e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;2.02e-63;4!UBERON:0000478;1.79e-42;24!UBERON:0000305;3.40e-37;7!UBERON:0005631;2.55e-26;10!UBERON:0000158;2.55e-26;10!UBERON:0000077;4.12e-10;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.07e-72,14;UBERON:0000158,2.07e-72,14;UBERON:0001987,1.81e-63,4;UBERON:0004340,1.81e-63,4;UBERON:0000478,1.73e-42,24;UBERON:0000305,3.40e-37,7;UBERON:0003124,1.03e-36,7;UBERON:0004871,1.15e-32,8;UBERON:0004923,1.04e-15,66;UBERON:0000995,8.39e-13,21;UBERON:0005795,2.96e-12,22;UBERON:0003975,2.96e-12,22;UBERON:0004175,7.16e-11,25;UBERON:0000077,1.81e-09,29;UBERON:0003134,1.46e-07,37;UBERON:0000474,1.46e-07,37;UBERON:0003100,6.95e-07,41 | |||
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|short_description=p@chr5:170176045..170176055,- | |short_description=p@chr5:170176045..170176055,- | ||
}} | }} |
Latest revision as of 12:59, 30 July 2015
Short description: | p@chr5:170176045..170176055, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:170176045..170176055, - |
Coexpression cluster: | C1264_Amniotic_Placental_chorionic_amniotic_Mesenchymal_lung_MCF7 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 3.03e-84 | 3 |
amniotic epithelial cell | 2.02e-57 | 2 |
extraembryonic cell | 1.61e-53 | 19 |
amnion mesenchymal stem cell | 4.79e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.07e-72 | 14 |
membranous layer | 2.07e-72 | 14 |
placenta | 1.81e-63 | 4 |
allantois | 1.81e-63 | 4 |
extraembryonic structure | 1.73e-42 | 24 |
amnion | 3.40e-37 | 7 |
chorion | 1.03e-36 | 7 |
somatic layer of lateral plate mesoderm | 1.15e-32 | 8 |
organ component layer | 1.04e-15 | 66 |
uterus | 8.39e-13 | 21 |
embryonic uterus | 2.96e-12 | 22 |
internal female genitalia | 2.96e-12 | 22 |
internal genitalia | 7.16e-11 | 25 |
mixed endoderm/mesoderm-derived structure | 1.81e-09 | 29 |
female reproductive organ | 1.46e-07 | 37 |
female reproductive system | 1.46e-07 | 37 |
female organism | 6.95e-07 | 41 |