FFCP PHASE1:Hg19::chr5:20471939..20471943,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:20471939..20471943,- | |||
|coexpression_cluster_id=C2060 | |||
|description=CAGE_peak_at_chr5:20471939..20471943,- | |description=CAGE_peak_at_chr5:20471939..20471943,- | ||
|id=chr5:20471939..20471943,- | |id=chr5:20471939..20471943,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;4.27e-34;2!CL:0000182;8.38e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.24e-09,8;CL:0000182,8.38e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.93e-23;3!UBERON:0004161;2.63e-07;11 | |||
|ontology_enrichment_disease=DOID:3193!2.74e-07!2;DOID:962!2.74e-07!2 | |ontology_enrichment_disease=DOID:3193!2.74e-07!2;DOID:962!2.74e-07!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!4.97e-16!12;UBERON:0002028!4.97e-16!12;UBERON:0007277!4.97e-16!12;UBERON:0004732!8.07e-15!13;UBERON:0003076!7.03e-13!15;UBERON:0003057!7.03e-13!15;UBERON:0002680!1.98e-12!9;UBERON:0001895!1.98e-12!9;UBERON:0010092!1.98e-12!9;UBERON:0000073!7.69e-11!94;UBERON:0001016!7.69e-11!94;UBERON:0001017!3.06e-10!82;UBERON:0005743!1.00e-09!86;UBERON:0002346!2.57e-09!90;UBERON:0001049!2.92e-09!57;UBERON:0005068!2.92e-09!57;UBERON:0006241!2.92e-09!57;UBERON:0007135!2.92e-09!57;UBERON:0002037!5.56e-09!6;UBERON:0006215!5.56e-09!6;UBERON:0002616!6.24e-09!59;UBERON:0003075!9.69e-08!86;UBERON:0007284!9.69e-08!86;UBERON:0000955!1.90e-07!69;UBERON:0006238!1.90e-07!69;UBERON:0003714!2.74e-07!2;UBERON:0002360!3.48e-07!2;UBERON:0000094!3.48e-07!2;UBERON:0007645!3.48e-07!2;UBERON:0001876!3.93e-07!2;UBERON:0001873!4.42e-07!2;UBERON:0010122!4.42e-07!2;UBERON:0001870!5.60e-07!2;UBERON:0002298!9.94e-07!8 | |ontology_enrichment_uberon=UBERON:0004733!4.97e-16!12;UBERON:0002028!4.97e-16!12;UBERON:0007277!4.97e-16!12;UBERON:0004732!8.07e-15!13;UBERON:0003076!7.03e-13!15;UBERON:0003057!7.03e-13!15;UBERON:0002680!1.98e-12!9;UBERON:0001895!1.98e-12!9;UBERON:0010092!1.98e-12!9;UBERON:0000073!7.69e-11!94;UBERON:0001016!7.69e-11!94;UBERON:0001017!3.06e-10!82;UBERON:0005743!1.00e-09!86;UBERON:0002346!2.57e-09!90;UBERON:0001049!2.92e-09!57;UBERON:0005068!2.92e-09!57;UBERON:0006241!2.92e-09!57;UBERON:0007135!2.92e-09!57;UBERON:0002037!5.56e-09!6;UBERON:0006215!5.56e-09!6;UBERON:0002616!6.24e-09!59;UBERON:0003075!9.69e-08!86;UBERON:0007284!9.69e-08!86;UBERON:0000955!1.90e-07!69;UBERON:0006238!1.90e-07!69;UBERON:0003714!2.74e-07!2;UBERON:0002360!3.48e-07!2;UBERON:0000094!3.48e-07!2;UBERON:0007645!3.48e-07!2;UBERON:0001876!3.93e-07!2;UBERON:0001873!4.42e-07!2;UBERON:0010122!4.42e-07!2;UBERON:0001870!5.60e-07!2;UBERON:0002298!9.94e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.31e-12;6!UBERON:0002680;1.08e-08;9!UBERON:0001895;1.08e-08;9!UBERON:0004733;7.70e-07;12!UBERON:0002028;7.70e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.45e-12,6;UBERON:0006215,2.45e-12,6;UBERON:0002680,1.12e-08,9;UBERON:0001895,1.12e-08,9;UBERON:0010092,1.12e-08,9;UBERON:0004733,7.92e-07,12;UBERON:0002028,7.92e-07,12;UBERON:0007277,7.92e-07,12 | |||
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|short_description=p@chr5:20471939..20471943,- | |short_description=p@chr5:20471939..20471943,- | ||
}} | }} |
Latest revision as of 14:09, 30 July 2015
Short description: | p@chr5:20471939..20471943, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:20471939..20471943, - |
Coexpression cluster: | C2060_cerebellum_Neural_parietal_Neurons_brain_maxillary_occipital |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.24e-09 | 8 |
hepatocyte | 8.38e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.45e-12 | 6 |
rhombic lip | 2.45e-12 | 6 |
regional part of metencephalon | 1.12e-08 | 9 |
metencephalon | 1.12e-08 | 9 |
future metencephalon | 1.12e-08 | 9 |
segmental subdivision of hindbrain | 7.92e-07 | 12 |
hindbrain | 7.92e-07 | 12 |
presumptive hindbrain | 7.92e-07 | 12 |