FFCP PHASE1:Hg19::chr5:67088974..67089009,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-31bp_to_uc003juz.2_5end | |association_with_transcript=-31bp_to_uc003juz.2_5end | ||
|cluster_id=chr5:67088974..67089009,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_uc003juz.2_5end | |description=CAGE_peak_1_at_uc003juz.2_5end | ||
|id=chr5:67088974..67089009,+ | |id=chr5:67088974..67089009,+ | ||
|ontology_enrichment_celltype=CL:0002623!8.19e-12!3;CL:0000181!6.25e-10!12;CL:0000417!6.25e-10!12;CL:0000668!6.25e-10!12;CL:0000414!6.25e-10!12;CL:0000412!6.25e-10!12;CL:0000182!6.25e-10!12;CL:0002617!9.03e-08!2;CL:0000622!3.18e-07!5 | |ontology_enrichment_celltype=CL:0002623!8.19e-12!3;CL:0000181!6.25e-10!12;CL:0000417!6.25e-10!12;CL:0000668!6.25e-10!12;CL:0000414!6.25e-10!12;CL:0000412!6.25e-10!12;CL:0000182!6.25e-10!12;CL:0002617!9.03e-08!2;CL:0000622!3.18e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002623;6.07e-43;3!CL:0000622;4.29e-26;5!CL:0000154;7.19e-22;6!CL:0000150;8.27e-15;9!CL:0000182;1.88e-11;12!CL:0002561;2.67e-08;2!CL:0002251;5.68e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,6.07e-43,3;CL:0000622,4.29e-26,5;CL:0000154,7.19e-22,6;CL:0000150,8.27e-15,9;CL:0000182,1.84e-11,12;CL:0000223,1.28e-08,58;CL:0002561,2.67e-08,2;CL:0002251,5.68e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.03e-14!115;UBERON:0002365!1.99e-11!31;UBERON:0002330!1.99e-11!31;UBERON:0004111!2.54e-08!241;UBERON:0000007!3.20e-08!2;UBERON:0002107!3.73e-08!19;UBERON:0006925!3.73e-08!19;UBERON:0008836!3.73e-08!19;UBERON:0009497!1.20e-07!25;UBERON:0000015!1.20e-07!25;UBERON:0002423!1.20e-07!25;UBERON:0006235!1.20e-07!25;UBERON:0004161!1.20e-07!25;UBERON:0002530!3.75e-07!59;UBERON:0000025!3.94e-07!194;UBERON:0008835!6.73e-07!22;UBERON:0003894!6.73e-07!22 | |ontology_enrichment_uberon=UBERON:0007023!5.03e-14!115;UBERON:0002365!1.99e-11!31;UBERON:0002330!1.99e-11!31;UBERON:0004111!2.54e-08!241;UBERON:0000007!3.20e-08!2;UBERON:0002107!3.73e-08!19;UBERON:0006925!3.73e-08!19;UBERON:0008836!3.73e-08!19;UBERON:0009497!1.20e-07!25;UBERON:0000015!1.20e-07!25;UBERON:0002423!1.20e-07!25;UBERON:0006235!1.20e-07!25;UBERON:0004161!1.20e-07!25;UBERON:0002530!3.75e-07!59;UBERON:0000025!3.94e-07!194;UBERON:0008835!6.73e-07!22;UBERON:0003894!6.73e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0002365;7.03e-23;31!UBERON:0002330;7.03e-23;31!UBERON:0001044;7.19e-22;6!UBERON:0003293;7.19e-22;6!UBERON:0003294;7.19e-22;6!UBERON:0010047;7.19e-22;6!UBERON:0003408;7.19e-22;6!UBERON:0000167;7.19e-22;6!UBERON:0002107;1.80e-12;19!UBERON:0006925;1.80e-12;19!UBERON:0001041;9.81e-10;14!UBERON:0002423;1.53e-09;25!UBERON:0002368;2.54e-09;33!UBERON:0005933;2.67e-08;2!UBERON:0005942;2.67e-08;2!UBERON:0005932;2.67e-08;2!UBERON:0000007;2.97e-08;2!UBERON:0000473;5.27e-08;8!UBERON:0002530;6.82e-08;57!UBERON:0000161;2.59e-07;19!UBERON:0000166;2.59e-07;19!UBERON:0000949;4.52e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,3.89e-22,31;UBERON:0002330,3.89e-22,31;UBERON:0001044,7.19e-22,6;UBERON:0003293,7.19e-22,6;UBERON:0003294,7.19e-22,6;UBERON:0010047,7.19e-22,6;UBERON:0000167,7.19e-22,6;UBERON:0002530,8.88e-15,59;UBERON:0003408,2.16e-13,10;UBERON:0002107,1.77e-12,19;UBERON:0006925,1.77e-12,19;UBERON:0008836,1.77e-12,19;UBERON:0008835,8.18e-11,22;UBERON:0003894,8.18e-11,22;UBERON:0009854,2.36e-10,23;UBERON:0002368,3.07e-10,35;UBERON:0007499,1.52e-09,25;UBERON:0009497,1.52e-09,25;UBERON:0000015,1.52e-09,25;UBERON:0002423,1.52e-09,25;UBERON:0006235,1.52e-09,25;UBERON:0004161,1.52e-09,25;UBERON:0009856,3.46e-09,26;UBERON:0005933,2.67e-08,2;UBERON:0005942,2.67e-08,2;UBERON:0005932,2.67e-08,2;UBERON:0000007,3.08e-08,2;UBERON:0000473,5.37e-08,8;UBERON:0000949,5.94e-08,45;UBERON:0001041,1.45e-07,87 | |||
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| ||
|short_description=p1@uc003juz.2 | |short_description=p1@uc003juz.2 | ||
}} | }} |
Latest revision as of 15:52, 30 July 2015
Short description: | p1@uc003juz.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc003juz.2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -31bp_to_uc003juz.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 6.07e-43 | 3 |
acinar cell | 4.29e-26 | 5 |
protein secreting cell | 7.19e-22 | 6 |
glandular epithelial cell | 8.27e-15 | 9 |
hepatocyte | 1.84e-11 | 12 |
endodermal cell | 1.28e-08 | 58 |
outer root sheath cell | 2.67e-08 | 2 |
epithelial cell of alimentary canal | 5.68e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
exocrine gland | 3.89e-22 | 31 |
exocrine system | 3.89e-22 | 31 |
saliva-secreting gland | 7.19e-22 | 6 |
gland of oral region | 7.19e-22 | 6 |
gland of foregut | 7.19e-22 | 6 |
oral gland | 7.19e-22 | 6 |
oral cavity | 7.19e-22 | 6 |
gland | 8.88e-15 | 59 |
gland of gut | 2.16e-13 | 10 |
liver | 1.77e-12 | 19 |
digestive gland | 1.77e-12 | 19 |
liver bud | 1.77e-12 | 19 |
hepatic diverticulum | 8.18e-11 | 22 |
liver primordium | 8.18e-11 | 22 |
digestive tract diverticulum | 2.36e-10 | 23 |
endocrine gland | 3.07e-10 | 35 |
epithelial sac | 1.52e-09 | 25 |
epithelium of foregut-midgut junction | 1.52e-09 | 25 |
anatomical boundary | 1.52e-09 | 25 |
hepatobiliary system | 1.52e-09 | 25 |
foregut-midgut junction | 1.52e-09 | 25 |
septum transversum | 1.52e-09 | 25 |
sac | 3.46e-09 | 26 |
hair root sheath | 2.67e-08 | 2 |
hair outer root sheath | 2.67e-08 | 2 |
bulb of hair follicle | 2.67e-08 | 2 |
pituitary gland | 3.08e-08 | 2 |
testis | 5.37e-08 | 8 |
endocrine system | 5.94e-08 | 45 |
foregut | 1.45e-07 | 87 |