FFCP PHASE1:Hg19::chr6:123110900..123110922,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10924 | |EntrezGene=10924 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=17389 | |HGNC=17389 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=467bp_to_BC066591_5end | |association_with_transcript=467bp_to_BC066591_5end | ||
|cluster_id=chr6:123110900..123110922,+ | |||
|description=CAGE_peak_5_at_SMPDL3A_5end | |description=CAGE_peak_5_at_SMPDL3A_5end | ||
|id=chr6:123110900..123110922,+ | |id=chr6:123110900..123110922,+ | ||
|ontology_enrichment_celltype=CL:0002393!2.07e-08!9;CL:0002397!2.07e-08!9 | |ontology_enrichment_celltype=CL:0002393!2.07e-08!9;CL:0002397!2.07e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0002393;4.61e-17;6!CL:0002397;4.61e-17;6!CL:1000487;8.52e-07;2!CL:0002535;8.52e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,1.41e-11,9;CL:0002397,1.41e-11,9;CL:1000487,9.54e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3307;8.52e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,6.42e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000062!3.46e-10!511;UBERON:0000475!1.34e-07!365;UBERON:0007023!1.85e-07!115;UBERON:0003101!2.61e-07!22;UBERON:0000079!2.61e-07!22 | |ontology_enrichment_uberon=UBERON:0000062!3.46e-10!511;UBERON:0000475!1.34e-07!365;UBERON:0007023!1.85e-07!115;UBERON:0003101!2.61e-07!22;UBERON:0000079!2.61e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;8.52e-07;2!UBERON:0004801;8.52e-07;2 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0.313454721478088,0,0.136874425072884,0.125542639594803,0,0,0,0.393364276848904,0,0,0,0.30120591877825,0,0,0,0,1.66198622559563,1.80490002723128,1.08505435357926,0.223915474239924,0,0.77272670290256,0.290796477559129,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0.612167784741805,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0.632924774881769,0.211255286311942,0.425208599930087,0.419317291016752,0.561643155732475,0.150176892841506,0,0.285012743741249,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.269421344139376,0,0,0,0,0,0.570471821544449,0,0,0.161872944368132,0,0,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0.427114777637135,0.211931901159562,0,0.515262646192195,0,0,0.168776332241266,0,0,0.276149695926898,0.323292113637624,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,0.590789906681404,0,0.860919069801795,0,0,0,0.100528972411631,0.185176890317059,0,0,1.44331342025273,0.115930404975077,0,0,0,0,0,0,0.246217006087397,0,0,0,0.16798212819886,0,0,0.290633938513962,0,0,0,0,0,0,0.126995788584338,0,0,0,0.102827492703324,0,0.571652865261156,0.224262168690721,0,0,0.258543431515556,3.57656445851882,0,0.26593811658487,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0.710783897485092,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0.315404830067869,0,0,0,0,0,0,0.260650843404249,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0,0,0,0.241718899183244,0,0,0.574072240823034,0.546273504020151,1.83574180943194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19427136107939,0,0,0,0,0,0,0,0,0,0.214840489736547,0.145016693914229,0,0.0890320356467374,0,0,0.127612712494584,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539617372749944,0.54907405947211,0.471249609382746,0,0,0,0,0,0,0.136499911407986,1.27264888758341,0,0,0,0,0,0,0,0.30982349809975,0,0.286822704408103,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,1.97701981631236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.333926115068718,0.16480387422676,0.211125408127993,0,0,1.25966373927138,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0.260427761085233,0.437299999980979,0,0,0,0.472775363535873,0,0.291604613383254,0,0,0.241192877250816,3.05163472634166,0.221158519862449,0,0,0,0,0,0.113942055847001,0.23056390438806,0.448788222048861,0.869178975376065,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0,0,0.442287822516696,0.611030144933625,0,0,0,0.337005664903385,0,0,0,0.19566461893209,0,0.394584402849391,1.20990716048664,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0.195984794828755,0,0.17472666824203,0,0,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0.225980740780532,0,0,0.50648636764703,0.195551382734803,0,0.213452994739353,0.599428828746391,0,0,0.171594997861965,0,0,0,0,0,0,0.866851769704557,0,0.136905378891993,0,0.429765441419957,0,0,0,0,0.199679000498991,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.13480708770837,0.0984274815147488,0,0,0.272406812223151,0,0.137539436597234,0.83088067605837,0,0,0.0607495566580247,0.670869375198532,0.315222829196793,0.419636705079985,0,0,0,0,0.662091970365432,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0.58620893471233,0,0.129282956361551,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0.573409195690071,0.221858103073705,0.124192805882767,0.138348634936231,0.124980407962107,0.151649117541648,0,0,0.468334905806882,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0.106691729694141,0.344429959321631,0,0,0.279759015438889,0,0.127894371303652,0,0,0.109209638192014,0,0.212574920101683,0.123935764259002,0,0,0,0,0.352675943690684,0,0,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0.471878893390961,0,0.231051332300676,0,0,0,0.0752103283492573,0.20170506870352,3.90757005616546,0.261906694481422,0.163771917510097,0,0.135075169236789,0,0,0.19024743058172,0,0,0.496211178389294,0.527613733078862,0,0.535701835878287,0.336283722218824,0,0.227662191351298,0.532214220975833,0.115233987555779,0,0.203909198930495,0.0657727735628491,0.118193840883968,0.111231401892069,0.627944742804112,0,0,0,1.29556554731173,0.47775168788705,0.142953088353313,0.316027223465453,0,0,0.801711364730253,0,0.17071847709395,0.691259661814092,0,0,0,0.423387050190929,0.68732060563215,0,0,0,0.196300467230486,0.121917924982269,0,0,0,0.485710993059139,0,0.198950775161368,0.237840181555137,0.79062257427272,0.329821550236287,0,0.617393264863557,0.218559560503957,0,0.245148321753905,0,0,0.297046400327086,0,0,0.0939839179798536,0.128915775947154,0,0,0,0.160482733378337,0,0,0.286679166302903,0,0,0.436350690340377,0,0,0,0.432626562123789,0,0,0,0,0,0,0.250707539292375,0.227336094654718,0.267964130156178,0.829169439458779,0.20686599172379,0,0.476128862927481,0,0.124149428591716,0.112131862580613,0,0,0,0.342233301085281,0.202056159043763,0.286888821570705,0,0,0.106727345877715,1.9307228228694,0.808426818959282,0,0.244482888365733,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0.313454721478088,0,0.136874425072884,0.125542639594803,0,0,0,0.393364276848904,0,0,0,0.30120591877825,0,0,0,0,1.66198622559563,1.80490002723128,1.08505435357926,0.223915474239924,0,0.77272670290256,0.290796477559129,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0.612167784741805,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0.632924774881769,0.211255286311942,0.425208599930087,0.419317291016752,0.561643155732475,0.150176892841506,0,0.285012743741249,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.269421344139376,0,0,0,0,0,0.570471821544449,0,0,0.161872944368132,0,0,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0.427114777637135,0.211931901159562,0,0.515262646192195,0,0,0.168776332241266,0,0,0.276149695926898,0.323292113637624,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,0.590789906681404,0,0.860919069801795,0,0,0,0.100528972411631,0.185176890317059,0,0,1.44331342025273,0.115930404975077,0,0,0,0,0,0,0.246217006087397,0,0,0,0.16798212819886,0,0,0.290633938513962,0,0,0,0,0,0,0.126995788584338,0,0,0,0.102827492703324,0,0.571652865261156,0.224262168690721,0,0,0.258543431515556,3.57656445851882,0,0.26593811658487,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0.710783897485092,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0.315404830067869,0,0,0,0,0,0,0.260650843404249,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0,0,0,0.241718899183244,0,0,0.574072240823034,0.546273504020151,1.83574180943194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19427136107939,0,0,0,0,0,0,0,0,0,0.214840489736547,0.145016693914229,0,0.0890320356467374,0,0,0.127612712494584,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539617372749944,0.54907405947211,0.471249609382746,0,0,0,0,0,0,0.136499911407986,1.27264888758341,0,0,0,0,0,0,0,0.30982349809975,0,0.286822704408103,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,1.97701981631236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.333926115068718,0.16480387422676,0.211125408127993,0,0,1.25966373927138,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0.260427761085233,0.437299999980979,0,0,0,0.472775363535873,0,0.291604613383254,0,0,0.241192877250816,3.05163472634166,0.221158519862449,0,0,0,0,0,0.113942055847001,0.23056390438806,0.448788222048861,0.869178975376065,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0,0,0.442287822516696,0.611030144933625,0,0,0,0.337005664903385,0,0,0,0.19566461893209,0,0.394584402849391,1.20990716048664,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0.195984794828755,0,0.17472666824203,0,0,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0.225980740780532,0,0,0.50648636764703,0.195551382734803,0,0.213452994739353,0.599428828746391,0,0,0.171594997861965,0,0,0,0,0,0,0.866851769704557,0,0.136905378891993,0,0.429765441419957,0,0,0,0,0.199679000498991,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.13480708770837,0.0984274815147488,0,0,0.272406812223151,0,0.137539436597234,0.83088067605837,0,0,0.0607495566580247,0.670869375198532,0.315222829196793,0.419636705079985,0,0,0,0,0.662091970365432,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0.58620893471233,0,0.129282956361551,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0.573409195690071,0.221858103073705,0.124192805882767,0.138348634936231,0.124980407962107,0.151649117541648,0,0,0.468334905806882,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0.106691729694141,0.344429959321631,0,0,0.279759015438889,0,0.127894371303652,0,0,0.109209638192014,0,0.212574920101683,0.123935764259002,0,0,0,0,0.352675943690684,0,0,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0.471878893390961,0,0.231051332300676,0,0,0,0.0752103283492573,0.20170506870352,3.90757005616546,0.261906694481422,0.163771917510097,0,0.135075169236789,0,0,0.19024743058172,0,0,0.496211178389294,0.527613733078862,0,0.535701835878287,0.336283722218824,0,0.227662191351298,0.532214220975833,0.115233987555779,0,0.203909198930495,0.0657727735628491,0.118193840883968,0.111231401892069,0.627944742804112,0,0,0,1.29556554731173,0.47775168788705,0.142953088353313,0.316027223465453,0,0,0.801711364730253,0,0.17071847709395,0.691259661814092,0,0,0,0.423387050190929,0.68732060563215,0,0,0,0.196300467230486,0.121917924982269,0,0,0,0.485710993059139,0,0.198950775161368,0.237840181555137,0.79062257427272,0.329821550236287,0,0.617393264863557,0.218559560503957,0,0.245148321753905,0,0,0.297046400327086,0,0,0.0939839179798536,0.128915775947154,0,0,0,0.160482733378337,0,0,0.286679166302903,0,0,0.436350690340377,0,0,0,0.432626562123789,0,0,0,0,0,0,0.250707539292375,0.227336094654718,0.267964130156178,0.829169439458779,0.20686599172379,0,0.476128862927481,0,0.124149428591716,0.112131862580613,0,0,0,0.342233301085281,0.202056159043763,0.286888821570705,0,0,0.106727345877715,1.9307228228694,0.808426818959282,0,0.244482888365733,0,0,0.201273793591026,0 | ||
|short_description=p5@SMPDL3A | |short_description=p5@SMPDL3A | ||
}} | }} |
Latest revision as of 05:18, 20 September 2015
Short description: | p5@SMPDL3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SMPDL3A_5end |
Coexpression cluster: | NA |
Association with transcript: | 467bp_to_BC066591_5end |
EntrezGene: | SMPDL3A |
HGNC: | 17389 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 1.41e-11 | 9 |
CD14-positive, CD16-positive monocyte | 1.41e-11 | 9 |
smooth muscle cell of prostate | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
teratoma | 6.42e-07 | 2 |