FFCP PHASE1:Hg19::chr6:13230246..13230266,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:13230246..13230266,+ | |||
|coexpression_cluster_id=C52 | |||
|description=CAGE_peak_at_chr6:13230246..13230266,+ | |description=CAGE_peak_at_chr6:13230246..13230266,+ | ||
|id=chr6:13230246..13230266,+ | |id=chr6:13230246..13230266,+ | ||
|ontology_enrichment_celltype=CL:0000945!5.16e-10!24;CL:0000826!5.16e-10!24;CL:0000542!3.70e-08!53;CL:0000051!3.70e-08!53;CL:0000838!8.97e-07!52;CL:0000946!9.81e-07!1;CL:0000786!9.81e-07!1;CL:0000980!9.81e-07!1 | |ontology_enrichment_celltype=CL:0000945!5.16e-10!24;CL:0000826!5.16e-10!24;CL:0000542!3.70e-08!53;CL:0000051!3.70e-08!53;CL:0000838!8.97e-07!52;CL:0000946!9.81e-07!1;CL:0000786!9.81e-07!1;CL:0000980!9.81e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.13e-29;24!CL:0000946;3.64e-29;1!CL:0000786;3.64e-29;1!CL:0000542;1.23e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.10e-29,24;CL:0000826,1.10e-29,24;CL:0000946,3.16e-29,1;CL:0000786,3.16e-29,1;CL:0000980,3.16e-29,1;CL:0000838,7.57e-20,52;CL:0000542,1.77e-19,53;CL:0000051,1.77e-19,53;CL:0000785,2.37e-15,2;CL:0000955,2.37e-15,2;CL:0000818,2.37e-15,2;CL:0000954,2.37e-15,2;CL:0000816,2.37e-15,2;CL:0002087,3.65e-12,115;CL:0002031,1.14e-11,120;CL:0000817,1.09e-10,3;CL:0000738,2.51e-10,136;CL:0002032,9.40e-09,161;CL:0000837,9.40e-09,161;CL:0000037,2.15e-08,168;CL:0000988,5.65e-08,177 | |||
|ontology_enrichment_development_v019=CL:0000954;2.55e-15;2!CL:0000051;1.23e-09;53 | |||
|ontology_enrichment_disease=DOID:630!9.30e-07!1;DOID:0050177!9.30e-07!1;DOID:0050427!9.30e-07!1 | |ontology_enrichment_disease=DOID:630!9.30e-07!1;DOID:0050177!9.30e-07!1;DOID:0050427!9.30e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:630;2.37e-29;1!DOID:0050177;2.37e-29;1!DOID:0050427;2.37e-29;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.37e-29,1;DOID:0050177,2.37e-29,1;DOID:0050427,2.37e-29,1 | |||
|ontology_enrichment_uberon=UBERON:0000200!1.93e-20!6;UBERON:0002780!3.59e-20!41;UBERON:0001890!3.59e-20!41;UBERON:0006240!3.59e-20!41;UBERON:0003080!1.24e-19!42;UBERON:0001869!3.34e-19!32;UBERON:0001049!2.08e-18!57;UBERON:0005068!2.08e-18!57;UBERON:0006241!2.08e-18!57;UBERON:0007135!2.08e-18!57;UBERON:0001893!5.74e-18!34;UBERON:0002020!6.43e-18!34;UBERON:0003528!6.43e-18!34;UBERON:0002616!1.12e-17!59;UBERON:0002771!1.42e-15!3;UBERON:0002791!1.72e-15!33;UBERON:0000955!2.12e-14!69;UBERON:0006238!2.12e-14!69;UBERON:0001950!7.03e-14!20;UBERON:0001017!2.90e-13!82;UBERON:0003056!1.04e-12!61;UBERON:0007023!1.06e-12!115;UBERON:0003075!1.11e-12!86;UBERON:0007284!1.11e-12!86;UBERON:0002619!1.44e-12!22;UBERON:0000073!1.67e-12!94;UBERON:0001016!1.67e-12!94;UBERON:0005743!1.70e-12!86;UBERON:0002346!5.81e-12!90;UBERON:0000956!5.59e-11!25;UBERON:0000203!5.59e-11!25;UBERON:0001871!5.00e-10!7;UBERON:0002308!4.69e-09!9;UBERON:0000125!4.69e-09!9;UBERON:0005383!1.13e-07!3;UBERON:0005382!1.13e-07!3;UBERON:0000153!2.66e-07!129;UBERON:0007811!2.66e-07!129;UBERON:0009663!5.59e-07!7;UBERON:0000033!9.65e-07!123 | |ontology_enrichment_uberon=UBERON:0000200!1.93e-20!6;UBERON:0002780!3.59e-20!41;UBERON:0001890!3.59e-20!41;UBERON:0006240!3.59e-20!41;UBERON:0003080!1.24e-19!42;UBERON:0001869!3.34e-19!32;UBERON:0001049!2.08e-18!57;UBERON:0005068!2.08e-18!57;UBERON:0006241!2.08e-18!57;UBERON:0007135!2.08e-18!57;UBERON:0001893!5.74e-18!34;UBERON:0002020!6.43e-18!34;UBERON:0003528!6.43e-18!34;UBERON:0002616!1.12e-17!59;UBERON:0002771!1.42e-15!3;UBERON:0002791!1.72e-15!33;UBERON:0000955!2.12e-14!69;UBERON:0006238!2.12e-14!69;UBERON:0001950!7.03e-14!20;UBERON:0001017!2.90e-13!82;UBERON:0003056!1.04e-12!61;UBERON:0007023!1.06e-12!115;UBERON:0003075!1.11e-12!86;UBERON:0007284!1.11e-12!86;UBERON:0002619!1.44e-12!22;UBERON:0000073!1.67e-12!94;UBERON:0001016!1.67e-12!94;UBERON:0005743!1.70e-12!86;UBERON:0002346!5.81e-12!90;UBERON:0000956!5.59e-11!25;UBERON:0000203!5.59e-11!25;UBERON:0001871!5.00e-10!7;UBERON:0002308!4.69e-09!9;UBERON:0000125!4.69e-09!9;UBERON:0005383!1.13e-07!3;UBERON:0005382!1.13e-07!3;UBERON:0000153!2.66e-07!129;UBERON:0007811!2.66e-07!129;UBERON:0009663!5.59e-07!7;UBERON:0000033!9.65e-07!123 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr6:13230246..13230266,+ | |short_description=p@chr6:13230246..13230266,+ | ||
}} | }} |
Latest revision as of 19:30, 30 July 2015
Short description: | p@chr6:13230246..13230266, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:13230246..13230266, + |
Coexpression cluster: | C52_adult_NK_chronic_cord_testis_embryonic_myeloma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.10e-29 | 24 |
pro-B cell | 1.10e-29 | 24 |
antibody secreting cell | 3.16e-29 | 1 |
plasma cell | 3.16e-29 | 1 |
plasmablast | 3.16e-29 | 1 |
lymphoid lineage restricted progenitor cell | 7.57e-20 | 52 |
lymphocyte | 1.77e-19 | 53 |
common lymphoid progenitor | 1.77e-19 | 53 |
mature B cell | 2.37e-15 | 2 |
pre-B-II cell | 2.37e-15 | 2 |
transitional stage B cell | 2.37e-15 | 2 |
small pre-B-II cell | 2.37e-15 | 2 |
immature B cell | 2.37e-15 | 2 |
nongranular leukocyte | 3.65e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.14e-11 | 120 |
precursor B cell | 1.09e-10 | 3 |
leukocyte | 2.51e-10 | 136 |
hematopoietic oligopotent progenitor cell | 9.40e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.40e-09 | 161 |
hematopoietic stem cell | 2.15e-08 | 168 |
hematopoietic cell | 5.65e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.37e-29 | 1 |
monogenic disease | 2.37e-29 | 1 |
xeroderma pigmentosum | 2.37e-29 | 1 |