FFCP PHASE1:Hg19::chr16:4897937..4897957,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:4897937..4897957,+
|short_description=p7@UBN1
|description=CAGE_peak_7_at_UBN1_5end
|association_with_transcript=25bp_to_ENST00000262376,ENST00000545171,N...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29855 | |EntrezGene=29855 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12506 | |HGNC=12506 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPG3 | |UniProt=Q9NPG3 | ||
|association_with_transcript=25bp_to_ENST00000262376,ENST00000545171,NM_001079514,uc002cyb.2_5end | |||
|cluster_id=chr16:4897937..4897957,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_7_at_UBN1_5end | |||
|id=chr16:4897937..4897957,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000775;7.12e-28;3!CL:0000081;2.91e-20;11!CL:0000094;2.19e-18;8!CL:0000097;2.04e-16;5!CL:0000163;2.32e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,7.14e-28,3;CL:0000081,2.98e-20,11;CL:0000094,2.19e-18,8;CL:0000097,1.45e-16,5;CL:0002028,1.45e-16,5;CL:0000163,1.93e-09,9;CL:0000766,1.48e-08,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;6.61e-10;1!DOID:10165;6.61e-10;1!DOID:1798;6.61e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.07e-09,1;DOID:10165,1.07e-09,1;DOID:1798,1.07e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p7@UBN1 | |||
}} | }} |
Latest revision as of 19:36, 16 September 2015
Short description: | p7@UBN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_UBN1_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 25bp_to_ENST00000262376, ENST00000545171, NM_001079514, uc002cyb.2_5end |
EntrezGene: | UBN1 |
HGNC: | 12506 |
UniProt: | Q9NPG3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 7.14e-28 | 3 |
blood cell | 2.98e-20 | 11 |
granulocyte | 2.19e-18 | 8 |
mast cell | 1.45e-16 | 5 |
basophil mast progenitor cell | 1.45e-16 | 5 |
endocrine cell | 1.93e-09 | 9 |
myeloid leukocyte | 1.48e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.07e-09 | 1 |
endocrine pancreas cancer | 1.07e-09 | 1 |
pancreatic endocrine carcinoma | 1.07e-09 | 1 |