FFCP PHASE1:Hg19::chr6:7543136..7543147,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:7543136..7543147,- | |||
|description=CAGE_peak_at_chr6:7543136..7543147,- | |description=CAGE_peak_at_chr6:7543136..7543147,- | ||
|id=chr6:7543136..7543147,- | |id=chr6:7543136..7543147,- | ||
|ontology_enrichment_celltype=CL:0002322!1.90e-08!5 | |ontology_enrichment_celltype=CL:0002322!1.90e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.68e-12;7!CL:0000586;1.68e-12;7!CL:0002549;2.23e-11;2!CL:0000346;7.02e-08;3!CL:1000428;7.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.59e-12,7;CL:0000586,1.59e-12,7;CL:0002549,2.47e-11,2;CL:0000346,6.34e-08,3;CL:1000428,6.34e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.94e-09;10!UBERON:0005564;4.94e-09;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;7.02e-09;22!DOID:2994;7.02e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,6.84e-09,22;DOID:2994,6.84e-09,22 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;5.71e-21;1!UBERON:0005629;2.23e-11;2!UBERON:0005358;2.23e-11;2!UBERON:0001886;2.23e-11;2!UBERON:0004086;2.23e-11;2!UBERON:0005282;2.23e-11;2!UBERON:0005281;2.23e-11;2!UBERON:0000473;4.66e-11;8!UBERON:0003135;2.72e-08;11!UBERON:0000412;7.02e-08;3!UBERON:0001992;7.02e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,9.43e-21,1;UBERON:0005629,2.47e-11,2;UBERON:0005358,2.47e-11,2;UBERON:0001886,2.47e-11,2;UBERON:0004086,2.47e-11,2;UBERON:0005282,2.47e-11,2;UBERON:0005281,2.47e-11,2;UBERON:0000473,4.43e-11,8;UBERON:0003135,2.62e-08,11;UBERON:0000412,6.34e-08,3;UBERON:0001992,6.34e-08,3 | |||
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| ||
|short_description=p@chr6:7543136..7543147,- | |short_description=p@chr6:7543136..7543147,- | ||
}} | }} |
Latest revision as of 03:09, 31 July 2015
Short description: | p@chr6:7543136..7543147, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:7543136..7543147, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.59e-12 | 7 |
germ cell | 1.59e-12 | 7 |
fibroblast of choroid plexus | 2.47e-11 | 2 |
hair follicle dermal papilla cell | 6.34e-08 | 3 |
stem cell of epidermis | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 9.43e-21 | 1 |
vascular plexus | 2.47e-11 | 2 |
ventricle of nervous system | 2.47e-11 | 2 |
choroid plexus | 2.47e-11 | 2 |
brain ventricle | 2.47e-11 | 2 |
ventricular system of brain | 2.47e-11 | 2 |
ventricular system of central nervous system | 2.47e-11 | 2 |
testis | 4.43e-11 | 8 |
male reproductive organ | 2.62e-08 | 11 |
dermal papilla | 6.34e-08 | 3 |
papillary layer of dermis | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 6.84e-09 | 22 |
germ cell cancer | 6.84e-09 | 22 |