FFCP PHASE1:Hg19::chr7:55053266..55053282,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:55053266..55053282,+ | |||
|coexpression_cluster_id=C2898 | |||
|description=CAGE_peak_at_chr7:55053266..55053282,+ | |description=CAGE_peak_at_chr7:55053266..55053282,+ | ||
|id=chr7:55053266..55053282,+ | |id=chr7:55053266..55053282,+ | ||
|ontology_enrichment_celltype=CL:0000066!7.88e-08!254 | |ontology_enrichment_celltype=CL:0000066!7.88e-08!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000076,1.41e-12,63 | |||
|ontology_enrichment_development_v019=UBERON:0008814;2.74e-12;2!UBERON:0010056;2.74e-12;2 | |||
|ontology_enrichment_disease=DOID:1749!1.79e-35!14;DOID:305!1.05e-14!106;DOID:0050687!1.38e-13!143;DOID:14566!2.22e-09!239;DOID:162!8.58e-09!235;DOID:4556!6.80e-08!3;DOID:7!3.24e-07!39 | |ontology_enrichment_disease=DOID:1749!1.79e-35!14;DOID:305!1.05e-14!106;DOID:0050687!1.38e-13!143;DOID:14566!2.22e-09!239;DOID:162!8.58e-09!235;DOID:4556!6.80e-08!3;DOID:7!3.24e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:1749;4.59e-56;14!DOID:4556;1.26e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.38e-56,14;DOID:305,4.30e-13,106;DOID:0050687,1.21e-09,143;DOID:4556,1.21e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0001264!9.17e-13!10;UBERON:0003922!9.17e-13!10;UBERON:0003923!9.17e-13!10;UBERON:0003924!9.17e-13!10;UBERON:0003921!9.17e-13!10;UBERON:0003343!1.17e-12!4;UBERON:0004785!1.17e-12!4;UBERON:0001045!1.40e-11!11;UBERON:0003729!3.24e-10!5;UBERON:0002075!9.30e-10!18;UBERON:0002114!9.33e-10!12;UBERON:0002108!2.04e-08!14;UBERON:0000344!3.78e-07!12;UBERON:0000997!8.81e-07!1;UBERON:0005056!8.81e-07!1 | |ontology_enrichment_uberon=UBERON:0001264!9.17e-13!10;UBERON:0003922!9.17e-13!10;UBERON:0003923!9.17e-13!10;UBERON:0003924!9.17e-13!10;UBERON:0003921!9.17e-13!10;UBERON:0003343!1.17e-12!4;UBERON:0004785!1.17e-12!4;UBERON:0001045!1.40e-11!11;UBERON:0003729!3.24e-10!5;UBERON:0002075!9.30e-10!18;UBERON:0002114!9.33e-10!12;UBERON:0002108!2.04e-08!14;UBERON:0000344!3.78e-07!12;UBERON:0000997!8.81e-07!1;UBERON:0005056!8.81e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000997;3.67e-23;1!UBERON:0005056;3.67e-23;1!UBERON:0004176;3.67e-23;1!UBERON:0003343;4.35e-23;4!UBERON:0004785;4.35e-23;4!UBERON:0000974;9.38e-16;6!UBERON:0001723;1.26e-08;3!UBERON:0001033;1.26e-08;3!UBERON:0003729;8.74e-08;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,2.10e-23,1;UBERON:0005056,2.10e-23,1;UBERON:0003343,3.68e-23,4;UBERON:0004785,3.68e-23,4;UBERON:0000974,7.08e-10,10;UBERON:0001723,1.12e-08,3;UBERON:0001033,1.12e-08,3;UBERON:0010056,1.12e-08,3;UBERON:0003729,8.31e-08,13 | |||
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|short_description=p@chr7:55053266..55053282,+ | |short_description=p@chr7:55053266..55053282,+ | ||
}} | }} |
Latest revision as of 10:47, 31 July 2015
Short description: | p@chr7:55053266..55053282, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:55053266..55053282, + |
Coexpression cluster: | C2898_oral_giant_large_epidermoid_squamous_embryonic_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous epithelial cell | 1.41e-12 | 63 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 2.10e-23 | 1 |
external female genitalia | 2.10e-23 | 1 |
mucosa of oral region | 3.68e-23 | 4 |
respiratory system mucosa | 3.68e-23 | 4 |
neck | 7.08e-10 | 10 |
tongue | 1.12e-08 | 3 |
gustatory system | 1.12e-08 | 3 |
future tongue | 1.12e-08 | 3 |
mouth mucosa | 8.31e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.38e-56 | 14 |
carcinoma | 4.30e-13 | 106 |
cell type cancer | 1.21e-09 | 143 |
lung large cell carcinoma | 1.21e-08 | 3 |