FFCP PHASE1:Hg19::chr16:69139543..69139585,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:69139543..69139585,+
|short_description=p2@HAS3
|description=CAGE_peak_2_at_HAS3_5end
|association_with_transcript=76bp_to_NM_001199280,uc010cfh.2_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3038 | |EntrezGene=3038 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4820 | |HGNC=4820 | ||
|TSSclassifier=strong | |||
|UniProt=O00219 | |UniProt=O00219 | ||
|association_with_transcript=76bp_to_NM_001199280,uc010cfh.2_5end | |||
|cluster_id=chr16:69139543..69139585,+ | |||
|coexpression_cluster_id=C130 | |||
|description=CAGE_peak_2_at_HAS3_5end | |||
|id=chr16:69139543..69139585,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.66e-21!254;CL:0002076!2.11e-13!43;CL:0000223!3.67e-11!59;CL:0002368!2.36e-08!13;CL:0002321!7.13e-08!248;CL:0002202!2.07e-07!9;CL:0002632!2.07e-07!9;CL:0002322!2.92e-07!5;CL:0002251!3.78e-07!21;CL:0000220!3.87e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.45e-18;5!CL:0000244;7.10e-08;4!CL:0000731;7.10e-08;4!CL:0002159;9.08e-08;14!CL:0000575;2.98e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.10e-18,5;CL:0000066,6.39e-12,253;CL:0000244,6.32e-08,4;CL:0000731,6.32e-08,4;CL:0002159,7.82e-08,14;CL:0000575,1.83e-07,2;CL:0000047,2.67e-07,8;CL:0002076,3.16e-07,42;CL:0000221,6.51e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.14e-14!106;DOID:1749!7.80e-10!14;DOID:0050687!2.47e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000464!2.35e-12!104;UBERON:0001004!9.42e-12!72;UBERON:0004119!2.52e-11!169;UBERON:0000925!2.52e-11!169;UBERON:0006595!2.52e-11!169;UBERON:0005181!5.22e-10!35;UBERON:0000466!1.17e-09!126;UBERON:0005153!2.05e-09!37;UBERON:0005178!2.28e-09!34;UBERON:0002224!2.28e-09!34;UBERON:0001007!3.37e-09!155;UBERON:0001555!3.37e-09!155;UBERON:0007026!3.37e-09!155;UBERON:0006554!4.90e-08!44;UBERON:0000161!5.67e-08!35;UBERON:0005157!7.69e-08!51;UBERON:0005911!9.43e-08!82;UBERON:0000065!9.49e-08!53;UBERON:0001008!1.07e-07!45;UBERON:0000475!2.80e-07!365;UBERON:0000481!4.52e-07!347;UBERON:0002048!4.75e-07!22;UBERON:0000117!4.75e-07!22;UBERON:0000171!4.75e-07!22;UBERON:0000170!4.75e-07!22;UBERON:0005597!4.75e-07!22;UBERON:0000118!4.75e-07!22;UBERON:0005177!5.66e-07!107;UBERON:0004921!9.85e-07!129;UBERON:0004185!9.85e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0005910;8.74e-09;6!UBERON:0000922;1.62e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005910,1.08e-08,6 | |||
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| ||
|short_description=p2@HAS3 | |||
}} | }} |
Latest revision as of 14:28, 17 September 2015
Short description: | p2@HAS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HAS3_5end |
Coexpression cluster: | C130_iPS_HES3GFP_H9_teratocarcinoma_testicular_colon_Alveolar |
Association with transcript: | 76bp_to_NM_001199280, uc010cfh.2_5end |
EntrezGene: | HAS3 |
HGNC: | 4820 |
UniProt: | O00219 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.10e-18 | 5 |
epithelial cell | 6.39e-12 | 253 |
transitional epithelial cell | 6.32e-08 | 4 |
urothelial cell | 6.32e-08 | 4 |
general ecto-epithelial cell | 7.82e-08 | 14 |
corneal epithelial cell | 1.83e-07 | 2 |
neuronal stem cell | 2.67e-07 | 8 |
endo-epithelial cell | 3.16e-07 | 42 |
ectodermal cell | 6.51e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
transitional epithelium | 1.08e-08 | 6 |