FFCP PHASE1:Hg19::chr10:97516340..97516350,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:97516340..97516350,+ | |||
|coexpression_cluster_id=C2087 | |||
|description=CAGE_peak_at_chr10:97516340..97516350,+ | |description=CAGE_peak_at_chr10:97516340..97516350,+ | ||
|id=chr10:97516340..97516350,+ | |id=chr10:97516340..97516350,+ | ||
|ontology_enrichment_celltype=CL:0000945!3.38e-30!24;CL:0000826!3.38e-30!24;CL:0002087!8.50e-21!119;CL:0000542!3.89e-20!53;CL:0000051!3.89e-20!53;CL:0000738!6.60e-20!140;CL:0000236!1.37e-19!14;CL:0000838!5.88e-19!52;CL:0002031!3.17e-16!124;CL:0000037!1.26e-13!172;CL:0000566!1.26e-13!172;CL:0002032!2.76e-12!165;CL:0000837!2.76e-12!165;CL:0000988!3.78e-12!182;CL:0000990!6.21e-07!8 | |ontology_enrichment_celltype=CL:0000945!3.38e-30!24;CL:0000826!3.38e-30!24;CL:0002087!8.50e-21!119;CL:0000542!3.89e-20!53;CL:0000051!3.89e-20!53;CL:0000738!6.60e-20!140;CL:0000236!1.37e-19!14;CL:0000838!5.88e-19!52;CL:0002031!3.17e-16!124;CL:0000037!1.26e-13!172;CL:0000566!1.26e-13!172;CL:0002032!2.76e-12!165;CL:0000837!2.76e-12!165;CL:0000988!3.78e-12!182;CL:0000990!6.21e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.63e-68;24!CL:0000236;4.55e-32;13!CL:0000542;3.93e-17;53!CL:0000946;6.05e-13;1!CL:0000786;6.05e-13;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.22e-68,24;CL:0000826,1.22e-68,24;CL:0000236,4.34e-40,14;CL:0000838,6.09e-31,52;CL:0000542,2.49e-30,53;CL:0000051,2.49e-30,53;CL:0002087,5.11e-13,115;CL:0000946,7.68e-13,1;CL:0000786,7.68e-13,1;CL:0000980,7.68e-13,1;CL:0002031,2.06e-12,120;CL:0000738,9.01e-11,136;CL:0002032,7.50e-09,161;CL:0000837,7.50e-09,161;CL:0000037,2.05e-08,168;CL:0000988,6.66e-08,177;CL:0000785,4.69e-07,2;CL:0000955,4.69e-07,2;CL:0000818,4.69e-07,2;CL:0000954,4.69e-07,2;CL:0000816,4.69e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;3.93e-17;53!UBERON:0001045;6.05e-13;1!CL:0000954;4.17e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4960;1.61e-13;1!DOID:0070004;1.61e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.61e-13,1;DOID:0070004,1.61e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.09e-22!115;UBERON:0002390!1.91e-10!102;UBERON:0003061!1.91e-10!102;UBERON:0002193!1.38e-09!112;UBERON:0004177!2.33e-09!7;UBERON:0000178!5.47e-09!15;UBERON:0000179!5.47e-09!15;UBERON:0000463!5.47e-09!15;UBERON:0002106!4.71e-07!3;UBERON:0004854!4.71e-07!3;UBERON:0009034!4.71e-07!3;UBERON:0002095!4.71e-07!3;UBERON:0004782!4.71e-07!3;UBERON:0003281!4.71e-07!3;UBERON:0009664!4.71e-07!3;UBERON:0002296!4.71e-07!3;UBERON:0005602!4.71e-07!3;UBERON:0001179!4.71e-07!3;UBERON:0006293!4.71e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!2.09e-22!115;UBERON:0002390!1.91e-10!102;UBERON:0003061!1.91e-10!102;UBERON:0002193!1.38e-09!112;UBERON:0004177!2.33e-09!7;UBERON:0000178!5.47e-09!15;UBERON:0000179!5.47e-09!15;UBERON:0000463!5.47e-09!15;UBERON:0002106!4.71e-07!3;UBERON:0004854!4.71e-07!3;UBERON:0009034!4.71e-07!3;UBERON:0002095!4.71e-07!3;UBERON:0004782!4.71e-07!3;UBERON:0003281!4.71e-07!3;UBERON:0009664!4.71e-07!3;UBERON:0002296!4.71e-07!3;UBERON:0005602!4.71e-07!3;UBERON:0001179!4.71e-07!3;UBERON:0006293!4.71e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001154;6.05e-13;1!UBERON:0001153;6.05e-13;1!UBERON:0009854;6.05e-13;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,5.38e-13,1;UBERON:0001153,5.38e-13,1;UBERON:0001045,5.38e-13,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67446920117829,1.80621296789881,2.2826126580967,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0.671746422719773,0,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0,0,0,0.633765858935825,0.212604299965044,0,0,0.300353785683013,0.16072558669708,0,0,0.182664153764634,0,0.546138611262131,5.33705552318133,1.28019066769952,0.800791974072025,0.574752439954483,0.661044872784862,3.81621501814146,1.70763890732835,1.17447437874188,1.52909291250092,0,0,0,0,0,0.411202997999018,0,0,0,0,0.334231370655521,0,0.221533894583621,0,0.25618263945135,0.520237390239513,0,0,0,0,0,0,0.113309342697566,0.383220493601921,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,1.13929437434833,0.238231775457789,0.411362273086194,0.648473311192717,0.540031437238115,0,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,0,1.65770349318689,0,0,1.84627208191604,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0,0.802577647298789,0.234264445725339,0.364909578431332,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338693328263138,0,0,0,0,0,0.674921674654501,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,2.17372795087739,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779441235357554,0.265729680626726,0.163565394255844,0,0,0,0,0,7.92188906439752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0.253663240775627,0,0,0.496211178389294,0,0,0,0,0,0,0,1.26757386311357,0,0.0679697329768317,0.131545547125698,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,1.78569444161722,0.515663103788617,0.89947040332436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.103432995861895,0,0,0.193766729508018,0.0620747142958579,0,0,0,0.217716747896961,0,0.606168477131288,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.366724332548599,0,0,0.201273793591026,0.320568492303233 | 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| ||
|short_description=p@chr10:97516340..97516350,+ | |short_description=p@chr10:97516340..97516350,+ | ||
}} | }} |
Latest revision as of 17:04, 23 July 2015
Short description: | p@chr10:97516340..97516350, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:97516340..97516350, + |
Coexpression cluster: | C2087_myeloma_plasma_b_acute_B_CD19_splenic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.22e-68 | 24 |
pro-B cell | 1.22e-68 | 24 |
B cell | 4.34e-40 | 14 |
lymphoid lineage restricted progenitor cell | 6.09e-31 | 52 |
lymphocyte | 2.49e-30 | 53 |
common lymphoid progenitor | 2.49e-30 | 53 |
nongranular leukocyte | 5.11e-13 | 115 |
antibody secreting cell | 7.68e-13 | 1 |
plasma cell | 7.68e-13 | 1 |
plasmablast | 7.68e-13 | 1 |
hematopoietic lineage restricted progenitor cell | 2.06e-12 | 120 |
leukocyte | 9.01e-11 | 136 |
hematopoietic oligopotent progenitor cell | 7.50e-09 | 161 |
hematopoietic multipotent progenitor cell | 7.50e-09 | 161 |
hematopoietic stem cell | 2.05e-08 | 168 |
hematopoietic cell | 6.66e-08 | 177 |
mature B cell | 4.69e-07 | 2 |
pre-B-II cell | 4.69e-07 | 2 |
transitional stage B cell | 4.69e-07 | 2 |
small pre-B-II cell | 4.69e-07 | 2 |
immature B cell | 4.69e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 5.38e-13 | 1 |
caecum | 5.38e-13 | 1 |
midgut | 5.38e-13 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.61e-13 | 1 |
myeloma | 1.61e-13 | 1 |