FFCP PHASE1:Hg19::chr11:27603162..27603176,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-50bp_to_ENST00000476147,ENST00000540179_5end | |association_with_transcript=-50bp_to_ENST00000476147,ENST00000540179_5end | ||
|cluster_id=chr11:27603162..27603176,+ | |||
|description=CAGE_peak_1_at_ENST00000476147_5end,CAGE_peak_1_at_ENST00000540179_5end | |description=CAGE_peak_1_at_ENST00000476147_5end,CAGE_peak_1_at_ENST00000540179_5end | ||
|id=chr11:27603162..27603176,+ | |id=chr11:27603162..27603176,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.66e-10!42;CL:0000003!4.26e-09!722;CL:0000860!4.82e-09!45 | |ontology_enrichment_celltype=CL:0002057!3.66e-10!42;CL:0000003!4.26e-09!722;CL:0000860!4.82e-09!45 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.77e-14;33!CL:0002057;5.77e-14;33!CL:0000473;5.42e-09;39!CL:0000234;5.42e-09;39!CL:0000197;6.13e-09;6!CL:0000098;6.13e-09;6!CL:0002167;6.13e-09;6!CL:0000576;2.30e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.01e-14,42;CL:0002057,6.01e-14,42;CL:0000473,2.19e-11,48;CL:0000234,2.19e-11,48;CL:0000197,1.29e-08,6;CL:0000098,1.29e-08,6;CL:0002167,1.29e-08,6;CL:0002009,2.17e-08,61;CL:0002194,6.91e-08,59;CL:0000576,6.91e-08,59;CL:0000040,6.91e-08,59;CL:0000559,6.91e-08,59;CL:0000839,3.75e-07,66;CL:0000557,4.07e-07,67 | |||
|ontology_enrichment_development_v019=CL:0002057;5.47e-10;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.92e-13;9!UBERON:0001557;8.92e-13;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,9.25e-13,9;UBERON:0002371,9.52e-08,76 | |||
|phase1_expression=0.726713517082227,0,0.281908808191942,0,0,0,0,0,0.522371256399677,0.737201809504527,0,0.218441372130172,0.791300934685361,0.866364470720326,0,4.03395087871065,3.61616716814386,5.84248072309899,2.43966399395253,0.369363174230364,0.408001382488506,0.940364164434263,0,0.273748850145768,0.376627918784408,0.0764134057479513,0.328402357799783,0,0,0,0.464448369948228,0,0,0,0.542270404062111,0.426507697462265,0.587200878669695,0,0.601633342410425,0,0.447830948479849,0.32389366601898,0,1.30858414901608,1.51150377475524,0.485168122375632,1.62700325833979,1.6446715520873,0.619412741790207,1.1507695692886,1.2808035326455,1.41889337933151,0.689491361473237,3.22742341791913,1.35426486594342,0.752969358170419,1.09162460023138,2.9214052977861,1.83650335422542,2.56743221660875,0.639337125799041,1.31940520074686,1.19678194572979,1.70489900213078,1.7412554317715,1.70215567407342,1.86846674698672,0.251248665256743,0,0.868755378820466,0,2.20966581592539,2.21523671208619,1.47878700418359,0.850417199860174,0.628975936525128,0.561643155732475,0.300353785683013,0.16072558669708,0.855038231223746,1.9891667719909,0.91332076882317,0,0.546138611262131,0,0,0,0,0,0,0,1.76171156811282,0.764546456250458,0,0.560508562981536,1.84368859342554,0.983548850569165,0.786021525498329,1.43921049299656,2.34061093546949,1.30368906653436,4.2610302516126,5.84480185223734,1.89397776704795,2.06224135232386,1.99380505125259,1.62482318259009,0.640456598628376,1.43065282315866,1.31550323682941,2.76350017785848,3.47763702882063,3.26230438956533,2.1403266247177,5.22677619024884,1.13309342697566,0,1.03088233644789,2.78321661221453,0.318565414324097,0.651083453856419,0.950452044448374,0.150575119077773,0.383959833463255,0,0.473554504088034,0,0.604820229674197,0.534880391567015,0.724122019413995,0,0,1.2786256184353,1.0843174571537,0,0.289693037921647,0,0.486634870302636,0.567208902984407,0.665188192387692,0.087834785693126,0.130979075497713,0,0,0.324547393654683,0.522389211897802,0.398873881556595,0.476981248610684,0.571994910780128,0.371457501329565,0.596287222100115,0.860234595106124,0.347140501607594,0.56530794192401,0,0,0.208994966536811,0.775250277507987,0,0,1.20848795132744,0,0,0.367663080345869,0,0.446498641420399,0.44905874525234,0.225222960966644,0,0,0.366403487860815,0,0,0,0.993943903390637,0.506522046658319,0.264818361626438,0,0,0,0,0,0,0.67355336034844,0.653847612453835,0.454072282934794,0,0.234321431833797,0,1.71141546463335,0.149448680551801,0.117434498643765,0.647491777472526,0.140450806702248,0.204154171254893,0.368502951935304,0.309977343527296,0,0.494533858557114,0,0.718618141816238,0.673344455816265,0.500474079487857,0,0.438977620880838,0,0.300476117813194,0.113432183160021,0.358779271377724,0.427114777637135,0,0,0,0,0.18611685633159,0.168776332241266,0.194874010322397,0,0.184099797284599,1.61646056818812,0.355009592516614,0.201504196455281,0.169560592310488,0.386521706326594,0.272746120590835,0,0.731842236777572,0.795178609928912,0.580969714347592,0.207322110030741,1.26160425437814,4.01475094983413,0,0,0,1.85747171212792,0.721879481669586,1.41968160047813,1.51726221070292,1.92808823906786,1.21323370005633,1.30727666455444,1.18635309555548,2.29213223872279,1.37355025587742,2.30848294167834,0.738155454624648,0,0.4115740113314,0,0,0,0,0.441463099414651,0.368965315629341,1.02940686179115,0.658501712451753,0,0.502644862058154,0.462942225792648,0,1.03993478527958,1.44331342025273,0.811512834825538,0.587043471179108,0.866198686566443,4.1668696131895,2.09279567458058,0,0,0,0,0,0,0.839910640994298,1.41775097242386,0.53735113621709,0.581267877027924,0,0,0.704387472105808,0.414656231081544,0.720599767084807,0.6312121671319,0.380987365753014,0,0,3.4214489204541,0.514137463516618,1.8020583470635,0.857479297891735,0.224262168690721,0.87192013766656,0.2933531432838,0.517086863031111,0,0,0.26593811658487,1.04007436911366,0.257207374262142,2.83698264046557,0.266422179016099,0.142977993658148,0.542621605391443,0.823240336780769,0.325736184293735,0.710783897485092,0.791951872933429,0,0,0.199945982364114,0,0,0,0.479249710983165,0,7.13184525203592,0.434343920002738,0.61642896765115,0.179060963239896,0.224170287987055,0.591092280605782,1.2937654491571,0.128343036279748,0,0,0,0.335032530668698,0,0,0,0,0.613457458595699,0,0.542530047399471,1.24782516918484,1.42743191037729,1.26161932027148,1.40569697991256,0,0,0,0,0,0.173767228936166,0.391602314925481,0.686286847621712,0.620304078368662,0.862856803274467,0.106727557803444,0.606255142892519,0,0,0.744323423456331,0.153461973288062,0,0.512556597022804,0,0.160853921143607,2.96836132889982,0.616838775210622,0.177561725313127,0.328508624055237,0,0.348631135379878,0.725156697549733,0.601519410909855,0.184161977871793,0.229628896329213,0.910455840033585,0.262248829918848,0.451199612907412,0.308061348417659,0,0,0.105551628892876,0,0.680374821106063,0,0,0.541892875087706,0.501689773854853,0.254876273045038,0,0,1.09629938322967,0.784306353074702,1.02580050046556,0.656029291399411,0.976135183992909,0.206082023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| ||
|short_description=p1@ENST00000476147,p1@ENST00000540179 | |short_description=p1@ENST00000476147,p1@ENST00000540179 | ||
}} | }} |
Latest revision as of 21:19, 23 July 2015
Short description: | p1@ENST00000476147, p1@ENST00000540179 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000476147_5end, CAGE_peak_1_at_ENST00000540179_5end |
Coexpression cluster: | NA |
Association with transcript: | -50bp_to_ENST00000476147, ENST00000540179_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.01e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.01e-14 | 42 |
defensive cell | 2.19e-11 | 48 |
phagocyte | 2.19e-11 | 48 |
receptor cell | 1.29e-08 | 6 |
sensory epithelial cell | 1.29e-08 | 6 |
olfactory epithelial cell | 1.29e-08 | 6 |
macrophage dendritic cell progenitor | 2.17e-08 | 61 |
monopoietic cell | 6.91e-08 | 59 |
monocyte | 6.91e-08 | 59 |
monoblast | 6.91e-08 | 59 |
promonocyte | 6.91e-08 | 59 |
myeloid lineage restricted progenitor cell | 3.75e-07 | 66 |
granulocyte monocyte progenitor cell | 4.07e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
larynx | 9.25e-13 | 9 |
bone marrow | 9.52e-08 | 76 |