FFCP PHASE1:Hg19::chr9:113342332..113342358,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79987 | |EntrezGene=79987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15985 | |HGNC=15985 | ||
|TSSclassifier=strong | |||
|UniProt=B3KQM1,Q4LDE5 | |UniProt=B3KQM1,Q4LDE5 | ||
|association_with_transcript=-172bp_to_ENST00000374461,ENST00000401783,NM_153366,uc004beu.2,uc010mtz.2,uc010mua.1_5end | |association_with_transcript=-172bp_to_ENST00000374461,ENST00000401783,NM_153366,uc004beu.2,uc010mtz.2,uc010mua.1_5end | ||
|cluster_id=chr9:113342332..113342358,- | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_4_at_SVEP1_5end | |description=CAGE_peak_4_at_SVEP1_5end | ||
|id=chr9:113342332..113342358,- | |id=chr9:113342332..113342358,- | ||
|ontology_enrichment_celltype=CL:0000057!9.28e-17!75;CL:0000055!6.02e-16!180;CL:0000680!5.08e-07!57;CL:0000056!5.08e-07!57;CL:0000355!5.08e-07!57 | |ontology_enrichment_celltype=CL:0000057!9.28e-17!75;CL:0000055!6.02e-16!180;CL:0000680!5.08e-07!57;CL:0000056!5.08e-07!57;CL:0000355!5.08e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002615;1.46e-08;3!CL:0002504;1.86e-08;3!CL:1000279;1.86e-08;3!CL:1000280;1.86e-08;3!CL:0002580;8.47e-08;3!CL:0002334;4.48e-07;12!CL:0000136;8.97e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,1.61e-08,3;CL:0002504,2.12e-08,3;CL:1000279,2.12e-08,3;CL:1000280,2.12e-08,3;CL:0002580,3.74e-08,3;CL:0002334,3.04e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.49e-10!83;UBERON:0002329!5.49e-10!83;UBERON:0003077!5.49e-10!83;UBERON:0003059!5.49e-10!83;UBERON:0007282!5.49e-10!83;UBERON:0009618!5.49e-10!83;UBERON:0007285!5.49e-10!83;UBERON:0004457!1.66e-09!12;UBERON:0000042!1.66e-09!12;UBERON:0000475!3.19e-09!365;UBERON:0002100!2.15e-08!216;UBERON:0004290!5.19e-08!70;UBERON:0002385!6.46e-08!63;UBERON:0001015!6.46e-08!63;UBERON:0000383!6.46e-08!63;UBERON:0003688!2.23e-07!6;UBERON:0002358!2.23e-07!6;UBERON:0003684!2.23e-07!6;UBERON:0001178!2.23e-07!6;UBERON:0001134!2.33e-07!61;UBERON:0002036!2.33e-07!61;UBERON:0003082!2.33e-07!61;UBERON:0000486!2.87e-07!82;UBERON:0000481!4.04e-07!347 | |ontology_enrichment_uberon=UBERON:0000914!5.49e-10!83;UBERON:0002329!5.49e-10!83;UBERON:0003077!5.49e-10!83;UBERON:0003059!5.49e-10!83;UBERON:0007282!5.49e-10!83;UBERON:0009618!5.49e-10!83;UBERON:0007285!5.49e-10!83;UBERON:0004457!1.66e-09!12;UBERON:0000042!1.66e-09!12;UBERON:0000475!3.19e-09!365;UBERON:0002100!2.15e-08!216;UBERON:0004290!5.19e-08!70;UBERON:0002385!6.46e-08!63;UBERON:0001015!6.46e-08!63;UBERON:0000383!6.46e-08!63;UBERON:0003688!2.23e-07!6;UBERON:0002358!2.23e-07!6;UBERON:0003684!2.23e-07!6;UBERON:0001178!2.23e-07!6;UBERON:0001134!2.33e-07!61;UBERON:0002036!2.33e-07!61;UBERON:0003082!2.33e-07!61;UBERON:0000486!2.87e-07!82;UBERON:0000481!4.04e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.04e-13;9!UBERON:0000042;2.04e-13;9!UBERON:0004905;4.99e-11;8!UBERON:0000982;4.99e-11;8!UBERON:0004770;4.99e-11;8!UBERON:0003688;5.46e-11;6!UBERON:0002358;5.46e-11;6!UBERON:0003684;5.46e-11;6!UBERON:0001178;5.46e-11;6!UBERON:0011135;1.67e-08;5!UBERON:0002216;1.67e-08;5!UBERON:0011134;1.67e-08;5!UBERON:0002209;1.67e-08;5!UBERON:0002213;1.67e-08;5!UBERON:0007844;1.67e-08;5!UBERON:0011138;1.67e-08;5!UBERON:0001130;1.67e-08;5!UBERON:0001066;1.67e-08;5!UBERON:0001468;1.67e-08;5!UBERON:0000310;1.85e-08;10!UBERON:0001443;1.28e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,3.42e-11,8;UBERON:0000982,3.42e-11,8;UBERON:0004770,3.42e-11,8;UBERON:0003688,6.04e-11,6;UBERON:0002358,6.04e-11,6;UBERON:0003684,6.04e-11,6;UBERON:0001178,6.04e-11,6;UBERON:0004457,8.77e-10,12;UBERON:0000042,8.77e-10,12;UBERON:0000310,1.08e-08,10;UBERON:0011135,1.33e-08,5;UBERON:0002216,1.33e-08,5;UBERON:0011134,1.33e-08,5;UBERON:0002209,1.33e-08,5;UBERON:0002213,1.33e-08,5;UBERON:0005856,1.33e-08,5;UBERON:0005866,1.33e-08,5;UBERON:0005863,1.33e-08,5;UBERON:0007844,1.33e-08,5;UBERON:0011138,1.33e-08,5;UBERON:0001130,1.33e-08,5;UBERON:0001066,1.33e-08,5;UBERON:0001468,1.33e-08,5;UBERON:0001443,7.89e-08,11 | |||
|phase1_expression=4.1786027232228,2.99740733447376,5.3562673556469,2.00146596706261,2.68176656656373,8.72338524100369,0,0,0.783556884599516,0.245733936501509,0,0,0,1.60896258848061,4.97096063591874,2.01697543935533,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.767175371061182,0.361439152384566,2.50668955317945,1.73815822752988,0,0.486634870302636,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,1.51956613997496,1.05927344650575,4.58938593198102,0.709336764396714,1.12135520028461,0,0,0,0.134710672069688,0.163461903113459,1.96764655938411,2.30470369792,0,0.936480230490962,0.570471821544449,0.298897361103602,0,0.161872944368132,0.140450806702248,1.22492502752936,0.491337269247072,1.23990937410919,0,0.741800787835671,0.910161361938026,0.718618141816238,0.168336113954066,0.125118519871964,0.277064115484183,0.438977620880838,0,1.95309476578576,0.113432183160021,0.179389635688862,0.427114777637135,1.69545520927649,0.600182192168805,0.206105058476878,0.772921620136887,0,0.506328996723799,0.0974370051611986,0.504867548488229,1.10459878370759,2.26304479546337,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,3.25057549622385,2.16563844500876,0.709840800239063,1.01150814046861,0.482022059766964,0.441175890929576,0,0.237270619111097,0.404493924480493,0,0.38474715694639,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0.651616610620649,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,7.15312891703765,0,0.797814349754612,0,0.257207374262142,0,0,1.57275793023962,2.17048642156577,0,0,2.48774364119782,0,1.50719688529793,0,0.699810938274399,0,0,0,0,0,1.42636905040718,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,5.15304265220388,0.500170521059677,2.71265023699736,0.623912584592421,2.49800584316026,2.36553622550902,4.91993942969395,1.80567659836631,0,0,0,0.184369168541703,0.695068915744663,0,0,0,0,0,0,0,0,1.73675465473144,3.99001130548962,1.96462066103151,3.97231362692673,3.07024349440022,0.965123526861645,5.93672265779964,0,0,0,0,0,0,0,0,0.68888668898764,1.63882051206045,2.88473712910733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.6335905758507,0,0,0,0,0,0,0.770243085573222,0,0,1.28904293841928,1.88521702088497,0,0.0890320356467374,0,0,0,0,0,2.20368642781448,0,0.308033580176089,0,0,0,0,0,0,3.62197368455267,0,1.71175595213568,0.636406495851874,0,3.95719406683292,2.47083326762449,2.00281083987667,0,0,0,0.975267478179181,0.487426979262569,0,0.409499734223957,1.41405431953713,1.13008116620243,0,0,0,1.15755106853338,0.655894752046633,0,0,0.281695602532241,0,1.17898849215745,0,0,1.68886108238131,5.92730807327823,0.379473173765715,1.04980416073495,0,0,0,34.0800558811941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0.281338832821026,0,0,0,1.19548792950642,0,0,1.63629892003448,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0.120596438625408,0,0.663475559587348,0,0,0,0,0.153900517007594,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23840590304675,0,0,0,0,0.202203398942031,0.802577647298789,0.234264445725339,0,0,0,0,0,0,3.91756793696625,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0.199679000498991,0,0,0.134366944973453,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.209818352539992,0,0,0.959575986597226,0.714695326373367,0,0,0.542999601753713,0.864221491201268,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0.427149650270779,1.41483874589699,0,0.496166021811951,0,0,0,0,0.2506898940227,0.612691153526923,0,0,0,0,0.250381861413,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0.233713309847224,0,0.947015026375446,2.0125432140206,1.77962244319307,0.915360273587694,0.151230923763239,0.15543720058278,0.73927574994817,0,0.449803112163605,0,0,0,0.521745061811734,0.450772826991655,1.90402606084398,0,0.181848659202559,0,0,0,0,0,0,0,0.192619830407303,1.28664954824955,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,1.05802783107205,9.18736432059601,0.0642292250964595,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.451261970095544,0.20170506870352,0,0,1.63771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,90.9199294167048,0,0,0.135939465953663,0,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,8.01711364730253,0,0.3414369541879,2.07377898544228,0.430227358820278,0,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,0,0.821302454849976,0,0.971421986118279,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753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|phase1_expression=4.1786027232228,2.99740733447376,5.3562673556469,2.00146596706261,2.68176656656373,8.72338524100369,0,0,0.783556884599516,0.245733936501509,0,0,0,1.60896258848061,4.97096063591874,2.01697543935533,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.767175371061182,0.361439152384566,2.50668955317945,1.73815822752988,0,0.486634870302636,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,1.51956613997496,1.05927344650575,4.58938593198102,0.709336764396714,1.12135520028461,0,0,0,0.134710672069688,0.163461903113459,1.96764655938411,2.30470369792,0,0.936480230490962,0.570471821544449,0.298897361103602,0,0.161872944368132,0.140450806702248,1.22492502752936,0.491337269247072,1.23990937410919,0,0.741800787835671,0.910161361938026,0.718618141816238,0.168336113954066,0.125118519871964,0.277064115484183,0.438977620880838,0,1.95309476578576,0.113432183160021,0.179389635688862,0.427114777637135,1.69545520927649,0.600182192168805,0.206105058476878,0.772921620136887,0,0.506328996723799,0.0974370051611986,0.504867548488229,1.10459878370759,2.26304479546337,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,3.25057549622385,2.16563844500876,0.709840800239063,1.01150814046861,0.482022059766964,0.441175890929576,0,0.237270619111097,0.404493924480493,0,0.38474715694639,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0.651616610620649,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,7.15312891703765,0,0.797814349754612,0,0.257207374262142,0,0,1.57275793023962,2.17048642156577,0,0,2.48774364119782,0,1.50719688529793,0,0.699810938274399,0,0,0,0,0,1.42636905040718,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,5.15304265220388,0.500170521059677,2.71265023699736,0.623912584592421,2.49800584316026,2.36553622550902,4.91993942969395,1.80567659836631,0,0,0,0.184369168541703,0.695068915744663,0,0,0,0,0,0,0,0,1.73675465473144,3.99001130548962,1.96462066103151,3.97231362692673,3.07024349440022,0.965123526861645,5.93672265779964,0,0,0,0,0,0,0,0,0.68888668898764,1.63882051206045,2.88473712910733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.6335905758507,0,0,0,0,0,0,0.770243085573222,0,0,1.28904293841928,1.88521702088497,0,0.0890320356467374,0,0,0,0,0,2.20368642781448,0,0.308033580176089,0,0,0,0,0,0,3.62197368455267,0,1.71175595213568,0.636406495851874,0,3.95719406683292,2.47083326762449,2.00281083987667,0,0,0,0.975267478179181,0.487426979262569,0,0.409499734223957,1.41405431953713,1.13008116620243,0,0,0,1.15755106853338,0.655894752046633,0,0,0.281695602532241,0,1.17898849215745,0,0,1.68886108238131,5.92730807327823,0.379473173765715,1.04980416073495,0,0,0,34.0800558811941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0.281338832821026,0,0,0,1.19548792950642,0,0,1.63629892003448,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0.120596438625408,0,0.663475559587348,0,0,0,0,0.153900517007594,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23840590304675,0,0,0,0,0.202203398942031,0.802577647298789,0.234264445725339,0,0,0,0,0,0,3.91756793696625,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0.199679000498991,0,0,0.134366944973453,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.209818352539992,0,0,0.959575986597226,0.714695326373367,0,0,0.542999601753713,0.864221491201268,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0.427149650270779,1.41483874589699,0,0.496166021811951,0,0,0,0,0.2506898940227,0.612691153526923,0,0,0,0,0.250381861413,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0.233713309847224,0,0.947015026375446,2.0125432140206,1.77962244319307,0.915360273587694,0.151230923763239,0.15543720058278,0.73927574994817,0,0.449803112163605,0,0,0,0.521745061811734,0.450772826991655,1.90402606084398,0,0.181848659202559,0,0,0,0,0,0,0,0.192619830407303,1.28664954824955,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,1.05802783107205,9.18736432059601,0.0642292250964595,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.451261970095544,0.20170506870352,0,0,1.63771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,90.9199294167048,0,0,0.135939465953663,0,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,8.01711364730253,0,0.3414369541879,2.07377898544228,0.430227358820278,0,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,0,0.821302454849976,0,0.971421986118279,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753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| ||
|short_description=p4@SVEP1 | |short_description=p4@SVEP1 | ||
}} | }} |
Latest revision as of 03:36, 20 September 2015
Short description: | p4@SVEP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SVEP1_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | -172bp_to_ENST00000374461, ENST00000401783, NM_153366, uc004beu.2, uc010mtz.2, uc010mua.1_5end |
EntrezGene: | SVEP1 |
HGNC: | 15985 |
UniProt: | B3KQM1Q4LDE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 1.61e-08 | 3 |
enteric smooth muscle cell | 2.12e-08 | 3 |
smooth muscle cell of large intestine | 2.12e-08 | 3 |
smooth muscle cell of colon | 2.12e-08 | 3 |
preadipocyte of the breast | 3.74e-08 | 3 |
preadipocyte | 3.04e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
articulation | 3.42e-11 | 8 |
skeletal joint | 3.42e-11 | 8 |
articular system | 3.42e-11 | 8 |
omentum | 6.04e-11 | 6 |
peritoneum | 6.04e-11 | 6 |
abdominal cavity | 6.04e-11 | 6 |
visceral peritoneum | 6.04e-11 | 6 |
cavity lining | 8.77e-10 | 12 |
serous membrane | 8.77e-10 | 12 |
breast | 1.08e-08 | 10 |
intervertebral cartilage | 1.33e-08 | 5 |
symphysis | 1.33e-08 | 5 |
nonsynovial joint | 1.33e-08 | 5 |
fibrous joint | 1.33e-08 | 5 |
cartilaginous joint | 1.33e-08 | 5 |
developing mesenchymal condensation | 1.33e-08 | 5 |
pre-cartilage condensation | 1.33e-08 | 5 |
cartilaginous condensation | 1.33e-08 | 5 |
cartilage element | 1.33e-08 | 5 |
post-cranial axial skeletal system | 1.33e-08 | 5 |
vertebral column | 1.33e-08 | 5 |
intervertebral disk | 1.33e-08 | 5 |
intervertebral joint | 1.33e-08 | 5 |
chest | 7.89e-08 | 11 |