FFCP PHASE1:Hg19::chr13:64652316..64652321,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:64652316..64652321,- | |||
|description=CAGE_peak_at_chr13:64652316..64652321,- | |description=CAGE_peak_at_chr13:64652316..64652321,- | ||
|id=chr13:64652316..64652321,- | |id=chr13:64652316..64652321,- | ||
|ontology_enrichment_celltype=CL:0000159!9.96e-10!2;CL:0000054!3.25e-09!2;CL:0000137!3.25e-09!2;CL:0000092!3.25e-09!2 | |ontology_enrichment_celltype=CL:0000159!9.96e-10!2;CL:0000054!3.25e-09!2;CL:0000137!3.25e-09!2;CL:0000092!3.25e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000159;1.33e-22;2!CL:0002553;3.44e-12;1!CL:0000319;3.44e-12;1!CL:0000313;3.44e-12;1!CL:0002149;1.98e-08;6!CL:0002255;1.98e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000159,1.19e-22,2;CL:0000319,2.46e-12,1;CL:0002553,3.85e-12,1;CL:0000313,4.31e-12,1;CL:0002149,1.94e-08,6;CL:0002255,1.94e-08,6;CL:1000415,9.02e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!4.03e-19!239;DOID:162!1.73e-18!235;DOID:0050687!2.21e-16!143;DOID:305!1.96e-12!106;DOID:299!2.12e-12!25;DOID:0050686!1.80e-09!137;DOID:200!3.25e-09!2;DOID:4305!3.25e-09!2;DOID:7!1.25e-08!39 | |ontology_enrichment_disease=DOID:14566!4.03e-19!239;DOID:162!1.73e-18!235;DOID:0050687!2.21e-16!143;DOID:305!1.96e-12!106;DOID:299!2.12e-12!25;DOID:0050686!1.80e-09!137;DOID:200!3.25e-09!2;DOID:4305!3.25e-09!2;DOID:7!1.25e-08!39 | ||
|ontology_enrichment_disease_v019=DOID:299;1.54e-15;25!DOID:2152;3.44e-12;1!DOID:3030;3.44e-12;1!DOID:3001;1.98e-08;6!DOID:305;4.77e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:299,1.55e-15,25;DOID:0050687,2.40e-15,143;DOID:305,2.89e-13,106;DOID:3030,2.46e-12,1;DOID:2152,4.31e-12,1;DOID:162,2.31e-11,235;DOID:14566,4.44e-11,239;DOID:3001,1.94e-08,6 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;1.75e-12;1!UBERON:0009842;1.75e-12;1!UBERON:0003704;1.75e-12;1!UBERON:0001171;1.75e-12;1!UBERON:0001172;1.75e-12;1!UBERON:0004911;3.44e-12;1!UBERON:0002294;3.35e-07;7!UBERON:0001173;3.35e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,2.20e-12,1;UBERON:0009842,2.20e-12,1;UBERON:0003704,2.20e-12,1;UBERON:0001171,2.20e-12,1;UBERON:0001172,2.20e-12,1;UBERON:0004911,4.31e-12,1 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.328402357799783,0.393553906568396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.58763361889412,0,0,0,0,0,0,0,0,0,0,0,0.728163130497081,0.445773537109913,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0.615424027305347,0,0,0,0,0,0,0,0,0,0,3.38556089410803,0,0,0,0,0,4.82640722538051,0,0,0,0,0,0,0,0,0,0,0,2.16489906109302,0.23056390438806,0,2.7161842980502,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0.649165919226273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548167698587004,0.794858446811959,0,0,1.92381168603681,0,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26961417541674,0.0984274815147488,0.677386656526276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72394293573612,0,3.28605065408364,0,0,0,0,0,0,0,0,0,0,2.96417447846916,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,1.96618327002975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495743057036009,0,0,0,1.60114149657094,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.951576261675644,0,0,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,3.1020638566432,2.8666168169323,1.11855431797792,1.07965256976767,0,0,0,0,0,0.935757853848423,0,3.09192236021678,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0.999411559249289,1.78553938605658,2.82315897372553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530450887527676,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:64652316..64652321,- | |short_description=p@chr13:64652316..64652321,- | ||
}} | }} |
Latest revision as of 16:55, 24 July 2015
Short description: | p@chr13:64652316..64652321, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:64652316..64652321, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seromucus secreting cell | 1.19e-22 | 2 |
mucus secreting cell | 2.46e-12 | 1 |
lung fibroblast | 3.85e-12 | 1 |
serous secreting cell | 4.31e-12 | 1 |
epithelial cell of uterus | 1.94e-08 | 6 |
stromal cell of endometrium | 1.94e-08 | 6 |
epithelial cell of gall bladder | 9.02e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 2.20e-12 | 1 |
acinus | 2.20e-12 | 1 |
intrahepatic bile duct | 2.20e-12 | 1 |
portal lobule | 2.20e-12 | 1 |
hepatic acinus | 2.20e-12 | 1 |
epithelium of female gonad | 4.31e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 1.55e-15 | 25 |
cell type cancer | 2.40e-15 | 143 |
carcinoma | 2.89e-13 | 106 |
mucinous adenocarcinoma | 2.46e-12 | 1 |
ovary epithelial cancer | 4.31e-12 | 1 |
cancer | 2.31e-11 | 235 |
disease of cellular proliferation | 4.44e-11 | 239 |
female reproductive endometrioid cancer | 1.94e-08 | 6 |