FFCP PHASE1:Hg19::chr9:139890122..139890140,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9022 | |EntrezGene=9022 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2064 | |HGNC=2064 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=58bp_to_ENST00000480181_5end | |association_with_transcript=58bp_to_ENST00000480181_5end | ||
|cluster_id=chr9:139890122..139890140,- | |||
|description=CAGE_peak_6_at_CLIC3_5end | |description=CAGE_peak_6_at_CLIC3_5end | ||
|id=chr9:139890122..139890140,- | |id=chr9:139890122..139890140,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002580;2.30e-15;3!CL:0002541;3.22e-15;3!CL:0000349;7.80e-15;19!CL:0002334;5.25e-14;12!CL:0002617;1.84e-10;2!CL:0000136;6.33e-09;13!CL:0002579;1.74e-07;3!CL:0002615;2.10e-07;3!CL:0002577;2.43e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,1.36e-15,3;CL:0002541,5.23e-15,3;CL:0000349,1.00e-14,19;CL:0002334,3.82e-14,12;CL:0000136,9.98e-11,15;CL:0002617,2.51e-10,2;CL:0002579,1.74e-07,3;CL:0002615,1.98e-07,3;CL:0002577,2.25e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.19e-14!14;UBERON:0000158!1.19e-14!14;UBERON:0003124!2.96e-11!7;UBERON:0003688!2.64e-10!6;UBERON:0002358!2.64e-10!6;UBERON:0003684!2.64e-10!6;UBERON:0001178!2.64e-10!6;UBERON:0004923!2.89e-09!57;UBERON:0000478!1.23e-08!24;UBERON:0004457!7.31e-08!12;UBERON:0000042!7.31e-08!12;UBERON:0000310!7.62e-08!10;UBERON:0001443!5.46e-07!11;UBERON:0001987!8.71e-07!4;UBERON:0004340!8.71e-07!4 | |ontology_enrichment_uberon=UBERON:0005631!1.19e-14!14;UBERON:0000158!1.19e-14!14;UBERON:0003124!2.96e-11!7;UBERON:0003688!2.64e-10!6;UBERON:0002358!2.64e-10!6;UBERON:0003684!2.64e-10!6;UBERON:0001178!2.64e-10!6;UBERON:0004923!2.89e-09!57;UBERON:0000478!1.23e-08!24;UBERON:0004457!7.31e-08!12;UBERON:0000042!7.31e-08!12;UBERON:0000310!7.62e-08!10;UBERON:0001443!5.46e-07!11;UBERON:0001987!8.71e-07!4;UBERON:0004340!8.71e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000310;5.15e-17;10!UBERON:0005631;1.24e-16;10!UBERON:0000158;1.24e-16;10!UBERON:0001443;2.06e-15;11!UBERON:0003124;3.22e-15;3!UBERON:0000920;3.22e-15;3!UBERON:0000478;1.43e-14;24!UBERON:0003688;3.13e-13;6!UBERON:0002358;3.13e-13;6!UBERON:0003684;3.13e-13;6!UBERON:0001178;3.13e-13;6!UBERON:0004457;3.32e-13;9!UBERON:0000042;3.32e-13;9!UBERON:0000341;5.64e-11;2!UBERON:0005406;4.20e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.96e-20,14;UBERON:0000158,1.96e-20,14;UBERON:0000310,4.38e-17,10;UBERON:0003124,5.11e-17,7;UBERON:0001443,1.78e-15,11;UBERON:0000920,5.23e-15,3;UBERON:0000478,1.83e-14,24;UBERON:0003688,2.95e-13,6;UBERON:0002358,2.95e-13,6;UBERON:0003684,2.95e-13,6;UBERON:0001178,2.95e-13,6;UBERON:0004923,5.13e-11,66;UBERON:0000341,6.56e-11,2;UBERON:0005406,2.29e-10,2;UBERON:0004457,6.47e-10,12;UBERON:0000042,6.47e-10,12 | |||
|phase1_expression=2.36181893051724,1.07050261945492,1.40954404095971,5.00366491765652,0.893922188854576,1.74467704820074,0,0,0,0,1.39560233594486,0.218441372130172,1.05506791291381,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,1.01392563272577,0,0.486634870302636,0,0,0,0.0654895377488563,1.09288586487763,0.370784442784429,0,0,0,0.476981248610684,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0.358779271377724,0,0,1.20036438433761,0,0,0.18611685633159,0.506328996723799,0.876933046450788,0.252433774244115,0,0,0,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,3.95102198979638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0.343143423810856,0,0,0.106727557803444,0.909382714338778,3.32870879020994,1.5119514666484,3.47350930946288,1.84154367945675,4.2099014164961,2.81906128362542,2.04682899626681,0.804269605718038,1.48418066444991,0,0,0,0,0,0,2.6065841139427,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,1.68886108238131,0.329294892959902,0,0,0,0,1.08890984861323,0.470719003883896,0.43050537267123,1.68471475667626,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,2.67268212749375,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437299999980979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0.46112780877612,0.359030577639089,0.54323685961004,2.55200927785536,1.00757352742049,4.79731298416771,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04135843001079,0.489961987071888,0,0.17472666824203,0,0.0967563312890851,0.146178634172371,0.164230914106418,0.872901148395775,0,0,0,0,0,0,0,0,1.59847687665704,0,0,0,0,0,0,0.271808412147228,0.313808538937,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0.429226048136571,0,0.0671834724867263,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72844298240254,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0.320362237703084,1.57204305099666,2.07119527673598,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0.380805212168795,0,0,0.107410557042488,0,1.19428766609585,0,1.03018711554838,0,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0,0.219284049578707,0,0,0.337884881306145,0,0.690860683462397,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,1.04762677792569,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0.955538938977433,0,0,0.121917924982269,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.924351257262837,0.432626562123789,0,0,0,0.101988829741982,0,0,0,0,0,0,0.103432995861895,2.34557380091079,3.33290204049236,0.0645889098360061,0.124149428591716,0,2.41859201457027,8.69103912520343,1.95945073107265,0,0.134704106029175,0,0.332660356546013,0,0,0,0,2.34640942403454,0,0.406896178315738,0,0.201273793591026,0 | |phase1_expression=2.36181893051724,1.07050261945492,1.40954404095971,5.00366491765652,0.893922188854576,1.74467704820074,0,0,0,0,1.39560233594486,0.218441372130172,1.05506791291381,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,1.01392563272577,0,0.486634870302636,0,0,0,0.0654895377488563,1.09288586487763,0.370784442784429,0,0,0,0.476981248610684,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0.358779271377724,0,0,1.20036438433761,0,0,0.18611685633159,0.506328996723799,0.876933046450788,0.252433774244115,0,0,0,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,3.95102198979638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0.343143423810856,0,0,0.106727557803444,0.909382714338778,3.32870879020994,1.5119514666484,3.47350930946288,1.84154367945675,4.2099014164961,2.81906128362542,2.04682899626681,0.804269605718038,1.48418066444991,0,0,0,0,0,0,2.6065841139427,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,1.68886108238131,0.329294892959902,0,0,0,0,1.08890984861323,0.470719003883896,0.43050537267123,1.68471475667626,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,2.67268212749375,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437299999980979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0.46112780877612,0.359030577639089,0.54323685961004,2.55200927785536,1.00757352742049,4.79731298416771,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04135843001079,0.489961987071888,0,0.17472666824203,0,0.0967563312890851,0.146178634172371,0.164230914106418,0.872901148395775,0,0,0,0,0,0,0,0,1.59847687665704,0,0,0,0,0,0,0.271808412147228,0.313808538937,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0.429226048136571,0,0.0671834724867263,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72844298240254,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0.320362237703084,1.57204305099666,2.07119527673598,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0.380805212168795,0,0,0.107410557042488,0,1.19428766609585,0,1.03018711554838,0,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0,0.219284049578707,0,0,0.337884881306145,0,0.690860683462397,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,1.04762677792569,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0.955538938977433,0,0,0.121917924982269,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.924351257262837,0.432626562123789,0,0,0,0.101988829741982,0,0,0,0,0,0,0.103432995861895,2.34557380091079,3.33290204049236,0.0645889098360061,0.124149428591716,0,2.41859201457027,8.69103912520343,1.95945073107265,0,0.134704106029175,0,0.332660356546013,0,0,0,0,2.34640942403454,0,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p6@CLIC3 | |short_description=p6@CLIC3 | ||
}} | }} |
Latest revision as of 14:52, 16 September 2015
Short description: | p6@CLIC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CLIC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 58bp_to_ENST00000480181_5end |
EntrezGene: | CLIC3 |
HGNC: | 2064 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 1.36e-15 | 3 |
chorionic membrane mesenchymal stem cell | 5.23e-15 | 3 |
extraembryonic cell | 1.00e-14 | 19 |
preadipocyte | 3.82e-14 | 12 |
fat cell | 9.98e-11 | 15 |
adipocyte of breast | 2.51e-10 | 2 |
omentum preadipocyte | 1.74e-07 | 3 |
adipocyte of omentum tissue | 1.98e-07 | 3 |
placental epithelial cell | 2.25e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.96e-20 | 14 |
membranous layer | 1.96e-20 | 14 |
breast | 4.38e-17 | 10 |
chorion | 5.11e-17 | 7 |
chest | 1.78e-15 | 11 |
egg chorion | 5.23e-15 | 3 |
extraembryonic structure | 1.83e-14 | 24 |
omentum | 2.95e-13 | 6 |
peritoneum | 2.95e-13 | 6 |
abdominal cavity | 2.95e-13 | 6 |
visceral peritoneum | 2.95e-13 | 6 |
organ component layer | 5.13e-11 | 66 |
throat | 6.56e-11 | 2 |
perirenal fat | 2.29e-10 | 2 |
cavity lining | 6.47e-10 | 12 |
serous membrane | 6.47e-10 | 12 |