FFCP PHASE1:Hg19::chr16:1128614..1128627,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=146336 | |EntrezGene=146336 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=103bp_to_NR_027242,uc002cko.2,uc002ckp.1_5end | |association_with_transcript=103bp_to_NR_027242,uc002cko.2,uc002ckp.1_5end | ||
|cluster_id=chr16:1128614..1128627,- | |||
|coexpression_cluster_id=C3532 | |||
|description=CAGE_peak_1_at_LOC146336_5end | |description=CAGE_peak_1_at_LOC146336_5end | ||
|id=chr16:1128614..1128627,- | |id=chr16:1128614..1128627,- | ||
|ontology_enrichment_celltype=CL:0002178!1.74e-07!3 | |ontology_enrichment_celltype=CL:0002178!1.74e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002178;1.17e-07;3!CL:0000167;9.81e-07;1!CL:0000164;9.81e-07;1!CL:0000502;9.81e-07;1!CL:0000172;9.81e-07;1!CL:0000173;9.81e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.17e-07,3;CL:0000167,9.81e-07,1;CL:0000164,9.81e-07,1;CL:0000502,9.81e-07,1;CL:0000172,9.81e-07,1;CL:0000173,9.81e-07,1;CL:0002351,9.81e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0009847;1.02e-07;3!UBERON:0003353;1.02e-07;3!CL:0002351;9.81e-07;1 | |||
|ontology_enrichment_disease=DOID:305!5.39e-13!106;DOID:0050687!1.07e-09!143;DOID:299!4.81e-07!25;DOID:3119!5.76e-07!14 | |ontology_enrichment_disease=DOID:305!5.39e-13!106;DOID:0050687!1.07e-09!143;DOID:299!4.81e-07!25;DOID:3119!5.76e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:299;6.88e-07;25!DOID:4430;9.81e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.05e-07,106;DOID:299,6.62e-07,25;DOID:4430,9.81e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004921!1.35e-14!129;UBERON:0004185!1.35e-14!129;UBERON:0001007!4.04e-12!155;UBERON:0001555!4.04e-12!155;UBERON:0007026!4.04e-12!155;UBERON:0005409!6.28e-12!35;UBERON:0004119!2.89e-10!169;UBERON:0000925!2.89e-10!169;UBERON:0006595!2.89e-10!169;UBERON:0000077!3.76e-09!130;UBERON:0001041!7.62e-08!98;UBERON:0000160!1.81e-07!27 | |ontology_enrichment_uberon=UBERON:0004921!1.35e-14!129;UBERON:0004185!1.35e-14!129;UBERON:0001007!4.04e-12!155;UBERON:0001555!4.04e-12!155;UBERON:0007026!4.04e-12!155;UBERON:0005409!6.28e-12!35;UBERON:0004119!2.89e-10!169;UBERON:0000925!2.89e-10!169;UBERON:0006595!2.89e-10!169;UBERON:0000077!3.76e-09!130;UBERON:0001041!7.62e-08!98;UBERON:0000160!1.81e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;9.76e-10;22!UBERON:0000945;1.28e-09;5!UBERON:0010039;1.28e-09;5!UBERON:0002108;1.34e-09;4!UBERON:0004921;6.29e-09;33!UBERON:0002372;8.80e-07;1!UBERON:0001961;8.80e-07;1!UBERON:0001744;8.80e-07;1!UBERON:0001042;8.80e-07;1!UBERON:0001735;8.80e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.23e-09,4;UBERON:0005409,1.45e-08,25;UBERON:0004921,2.15e-08,118;UBERON:0001007,3.64e-07,145;UBERON:0001555,3.64e-07,145;UBERON:0007026,3.64e-07,145;UBERON:0002372,8.81e-07,1;UBERON:0001961,8.81e-07,1;UBERON:0001744,8.81e-07,1;UBERON:0001735,8.81e-07,1 | |||
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| ||
|short_description=p1@LOC146336 | |short_description=p1@LOC146336 | ||
}} | }} |
Latest revision as of 05:31, 20 September 2015
Short description: | p1@LOC146336 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC146336_5end |
Coexpression cluster: | C3532_tubular_signet_smallcell_argyrophil_prostate_tonsil_somatostatinoma |
Association with transcript: | 103bp_to_NR_027242, uc002cko.2, uc002ckp.1_5end |
EntrezGene: | LOC146336 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.17e-07 | 3 |
peptide hormone secreting cell | 9.81e-07 | 1 |
enteroendocrine cell | 9.81e-07 | 1 |
type D enteroendocrine cell | 9.81e-07 | 1 |
somatostatin secreting cell | 9.81e-07 | 1 |
pancreatic D cell | 9.81e-07 | 1 |
progenitor cell of endocrine pancreas | 9.81e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
small intestine | 1.23e-09 | 4 |
gastrointestinal system | 1.45e-08 | 25 |
subdivision of digestive tract | 2.15e-08 | 118 |
digestive system | 3.64e-07 | 145 |
digestive tract | 3.64e-07 | 145 |
primitive gut | 3.64e-07 | 145 |
tonsil | 8.81e-07 | 1 |
mucosa-associated lymphoid tissue | 8.81e-07 | 1 |
lymphoid tissue | 8.81e-07 | 1 |
tonsillar ring | 8.81e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.05e-07 | 106 |
adenocarcinoma | 6.62e-07 | 25 |
somatostatinoma | 9.81e-07 | 1 |