FFCP PHASE1:Hg19::chr16:8954269..8954303,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:8954269..8954303,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr16:8954269..8954303,+ | |description=CAGE_peak_at_chr16:8954269..8954303,+ | ||
|id=chr16:8954269..8954303,+ | |id=chr16:8954269..8954303,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;4.75e-22;12!CL:0000746;9.90e-11;3!CL:0002541;1.14e-10;3!CL:0000737;2.26e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.75e-22,12;CL:0000746,9.90e-11,3;CL:0000513,9.90e-11,3;CL:0002541,1.20e-10,3;CL:0000737,2.26e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000513;9.90e-11;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.99e-23!115;UBERON:0003075!1.22e-07!86;UBERON:0007284!1.22e-07!86;UBERON:0001049!2.65e-07!57;UBERON:0005068!2.65e-07!57;UBERON:0006241!2.65e-07!57;UBERON:0007135!2.65e-07!57;UBERON:0002346!4.18e-07!90;UBERON:0000007!4.52e-07!2 | |ontology_enrichment_uberon=UBERON:0007023!3.99e-23!115;UBERON:0003075!1.22e-07!86;UBERON:0007284!1.22e-07!86;UBERON:0001049!2.65e-07!57;UBERON:0005068!2.65e-07!57;UBERON:0006241!2.65e-07!57;UBERON:0007135!2.65e-07!57;UBERON:0002346!4.18e-07!90;UBERON:0000007!4.52e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.05e-24;19!UBERON:0006925;2.05e-24;19!UBERON:0002423;1.04e-18;25!UBERON:0002365;1.09e-15;31!UBERON:0002330;1.09e-15;31!UBERON:0002368;1.14e-12;33!UBERON:0003124;1.14e-10;3!UBERON:0000920;1.14e-10;3!UBERON:0000949;1.18e-10;43!UBERON:0005172;6.78e-08;52!UBERON:0005173;6.78e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.05e-24,19;UBERON:0006925,2.05e-24,19;UBERON:0008836,2.05e-24,19;UBERON:0008835,3.56e-21,22;UBERON:0003894,3.56e-21,22;UBERON:0009854,2.78e-20,23;UBERON:0007499,1.04e-18,25;UBERON:0009497,1.04e-18,25;UBERON:0000015,1.04e-18,25;UBERON:0002423,1.04e-18,25;UBERON:0006235,1.04e-18,25;UBERON:0004161,1.04e-18,25;UBERON:0009856,5.17e-18,26;UBERON:0002365,3.35e-15,31;UBERON:0002330,3.35e-15,31;UBERON:0002368,1.58e-13,35;UBERON:0000920,1.20e-10,3;UBERON:0000949,1.24e-10,45;UBERON:0003929,6.15e-09,54;UBERON:0005172,6.15e-09,54;UBERON:0005173,6.15e-09,54;UBERON:0002530,3.24e-08,59;UBERON:0002417,4.37e-08,60;UBERON:0000916,4.37e-08,60 | |||
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| ||
|short_description=p@chr16:8954269..8954303,+ | |short_description=p@chr16:8954269..8954303,+ | ||
}} | }} |
Latest revision as of 13:27, 25 July 2015
Short description: | p@chr16:8954269..8954303, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:8954269..8954303, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.75e-22 | 12 |
cardiac muscle cell | 9.90e-11 | 3 |
cardiac muscle myoblast | 9.90e-11 | 3 |
chorionic membrane mesenchymal stem cell | 1.20e-10 | 3 |
striated muscle cell | 2.26e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
liver | 2.05e-24 | 19 |
digestive gland | 2.05e-24 | 19 |
liver bud | 2.05e-24 | 19 |
hepatic diverticulum | 3.56e-21 | 22 |
liver primordium | 3.56e-21 | 22 |
digestive tract diverticulum | 2.78e-20 | 23 |
epithelial sac | 1.04e-18 | 25 |
epithelium of foregut-midgut junction | 1.04e-18 | 25 |
anatomical boundary | 1.04e-18 | 25 |
hepatobiliary system | 1.04e-18 | 25 |
foregut-midgut junction | 1.04e-18 | 25 |
septum transversum | 1.04e-18 | 25 |
sac | 5.17e-18 | 26 |
exocrine gland | 3.35e-15 | 31 |
exocrine system | 3.35e-15 | 31 |
endocrine gland | 1.58e-13 | 35 |
egg chorion | 1.20e-10 | 3 |
endocrine system | 1.24e-10 | 45 |
gut epithelium | 6.15e-09 | 54 |
abdomen element | 6.15e-09 | 54 |
abdominal segment element | 6.15e-09 | 54 |
gland | 3.24e-08 | 59 |
abdominal segment of trunk | 4.37e-08 | 60 |
abdomen | 4.37e-08 | 60 |