FFCP PHASE1:Hg19::chrX:135749564..135749575,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9459 | |EntrezGene=9459 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=685 | |HGNC=685 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-127bp_to_AK129909_5end | |association_with_transcript=-127bp_to_AK129909_5end | ||
|cluster_id=chrX:135749564..135749575,- | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_19_at_ARHGEF6_5end | |description=CAGE_peak_19_at_ARHGEF6_5end | ||
|id=chrX:135749564..135749575,- | |id=chrX:135749564..135749575,- | ||
|ontology_enrichment_celltype=CL:0002032!8.54e-19!165;CL:0000837!8.54e-19!165;CL:0000037!9.84e-19!172;CL:0000566!9.84e-19!172;CL:0000988!1.36e-16!182;CL:0002087!8.73e-13!119;CL:0002031!1.05e-12!124;CL:0000738!1.74e-12!140;CL:0000763!2.23e-11!112;CL:0000049!2.23e-11!112;CL:0002057!1.06e-08!42;CL:0000860!9.70e-08!45;CL:0000542!1.15e-07!53;CL:0000051!1.15e-07!53;CL:0000838!4.69e-07!52;CL:0000839!5.23e-07!70;CL:0000766!1.00e-06!76 | |ontology_enrichment_celltype=CL:0002032!8.54e-19!165;CL:0000837!8.54e-19!165;CL:0000037!9.84e-19!172;CL:0000566!9.84e-19!172;CL:0000988!1.36e-16!182;CL:0002087!8.73e-13!119;CL:0002031!1.05e-12!124;CL:0000738!1.74e-12!140;CL:0000763!2.23e-11!112;CL:0000049!2.23e-11!112;CL:0002057!1.06e-08!42;CL:0000860!9.70e-08!45;CL:0000542!1.15e-07!53;CL:0000051!1.15e-07!53;CL:0000838!4.69e-07!52;CL:0000839!5.23e-07!70;CL:0000766!1.00e-06!76 | ||
|ontology_enrichment_celltype_v019=CL:0000775;8.73e-45;3!CL:0000094;1.50e-17;8!CL:0000081;4.66e-13;11!CL:0002548;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,6.25e-45,3;CL:0000094,1.33e-17,8;CL:0000081,4.25e-13,11;CL:0002548,8.97e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!1.26e-11!51;DOID:0060083!1.26e-11!51;DOID:1240!6.07e-10!39 | |ontology_enrichment_disease=DOID:2531!1.26e-11!51;DOID:0060083!1.26e-11!51;DOID:1240!6.07e-10!39 | ||
|ontology_enrichment_disease_v019=DOID:5409;1.22e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.22e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.01e-07!102;UBERON:0003061!7.01e-07!102 | |ontology_enrichment_uberon=UBERON:0002390!7.01e-07!102;UBERON:0003061!7.01e-07!102 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0.246301768349837,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0.293600439334847,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0.376484679085209,0.545812300115692,0.224723484445085,0.306083892370903,0,0,0.329851300186716,0.199463657621632,0,0.290209238628584,0,0,0.502497330513487,0.521482918420201,0,0.605399502633369,0.736555271975129,0,0.422510572623884,0.425208599930087,0,0.112328631146495,0,0.32145117339416,0.570025487482497,0.39783335439818,0,0,0,0.889509253863555,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0.786021525498329,0.205601498999509,0,0.32592226663359,0,0,0.779873198196215,0.589211814949674,0.886135578334485,0.270803863765016,0.640456598628376,0.520237390239513,0.164437904603676,0.552700035571697,0,0.14828656316206,0,0,0,0,0.34362744548263,0.506039384039006,0,0,0,0,0,0,0,0,0,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0.973269740605272,0.189069634328136,0,0.087834785693126,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0.877955241761676,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.528290604079356,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0.336255431980582,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0.167516265334349,0,1.49801404789436,8.97484377612075,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522870902049801,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0,0,0,0.79312517629427,0,0,0,0.371606350251437,0,0.0711418433484141,0.637705090915289,0.199579371432817,0.957526850661834,0.211673582723883,0.649243880549111,0.842391534340376,0.456469358066384,0,0,0.169291777801603,0.481764225311099,0.201799707191048,0,0,0,0,0.166849141711909,0.19538809540204,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331737779793674,0,0.219385397153973,0,0,0,0,0,0,0,0.31900115973192,0,0,1.02193298195737,0.627921025580099,0,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0.729819156862664,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0.600420288709789,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0.170388021785422,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0.395223263795889,0.121792598380896,0,0,0,0,0,0,0,0.488105059607853,0.1251909307065,0,0.221858103073705,0,0,0,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0.327609848846413,0,0,0.19998739585493,0.213383459388282,0,0,0.184105950251841,0,0,0,0,0.786329709279482,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0,0.20170506870352,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0.348724276104376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,1.1598144313382,0,0,0.198950775161368,0,0,2.96839395212659,0,0,0,0,0,0,0.392616934229891,0.297046400327086,0.4226557275834,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0.573358332605805,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.20686599172379,0,0,0.0645889098360061,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 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| ||
|short_description=p19@ARHGEF6 | |short_description=p19@ARHGEF6 | ||
}} | }} |
Latest revision as of 15:01, 19 September 2015
Short description: | p19@ARHGEF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_ARHGEF6_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -127bp_to_AK129909_5end |
EntrezGene: | ARHGEF6 |
HGNC: | 685 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 6.25e-45 | 3 |
granulocyte | 1.33e-17 | 8 |
blood cell | 4.25e-13 | 11 |
cardiac fibroblast | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.22e-09 | 4 |