FFCP PHASE1:Hg19::chr17:38976407..38976413,-: Difference between revisions
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|id=chr17:38976407..38976413,-
|short_description=p20@KRT10
|description=CAGE_peak_20_at_KRT10_5end
|association_with_transcript=-364bp_to_ENST00000459776_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3858 | |EntrezGene=3858 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=6413 | |HGNC=6413 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-364bp_to_ENST00000459776_5end | |||
|cluster_id=chr17:38976407..38976413,- | |||
|coexpression_cluster_id=C202 | |||
|description=CAGE_peak_20_at_KRT10_5end | |||
|id=chr17:38976407..38976413,- | |||
|ontology_enrichment_celltype=CL:0000622!2.73e-51!5;CL:0000154!6.48e-43!6;CL:0002623!1.49e-38!3;CL:0000150!6.20e-29!9;CL:0001014!1.54e-15!2;CL:0001016!1.54e-15!2;CL:0000317!1.78e-15!2;CL:1000448!1.78e-15!2;CL:0002308!1.78e-15!2;CL:0002140!1.78e-15!2;CL:0000151!5.33e-08!35;CL:0000453!5.38e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002623;4.27e-34;3!CL:0000622;4.21e-21;5!CL:0000154;7.67e-18;6!CL:0000150;2.19e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,4.27e-34,3;CL:0000622,4.21e-21,5;CL:0000154,7.67e-18,6;CL:0000150,2.19e-12,9 | |||
|ontology_enrichment_development_v019=UBERON:0004874;2.55e-98;1 | |||
|ontology_enrichment_disease=DOID:4362!6.77e-07!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000989!9.99e-30!1;UBERON:0008811!9.99e-30!1;UBERON:0006258!9.99e-30!1;UBERON:0005876!9.99e-30!1;UBERON:0004874!9.99e-30!1;UBERON:0007029!2.37e-29!1;UBERON:0001044!7.13e-20!6;UBERON:0003293!7.13e-20!6;UBERON:0003294!7.13e-20!6;UBERON:0010047!7.13e-20!6;UBERON:0000167!7.13e-20!6;UBERON:0002419!1.78e-15!2;UBERON:0007771!1.78e-15!2;UBERON:0003297!1.78e-15!2;UBERON:0001821!1.78e-15!2;UBERON:0003487!1.78e-15!2;UBERON:0001820!1.78e-15!2;UBERON:0005089!1.78e-15!2;UBERON:0005088!1.78e-15!2;UBERON:0003408!2.37e-12!10;UBERON:0001003!4.56e-09!14;UBERON:0007376!4.56e-09!14;UBERON:0007383!4.56e-09!14;UBERON:0002365!6.01e-09!31;UBERON:0002330!6.01e-09!31;UBERON:0000014!2.26e-08!4;UBERON:0000078!2.77e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0000989;2.55e-98;1!UBERON:0008811;2.55e-98;1!UBERON:0001044;7.67e-18;6!UBERON:0003293;7.67e-18;6!UBERON:0003294;7.67e-18;6!UBERON:0010047;7.67e-18;6!UBERON:0003408;7.67e-18;6!UBERON:0000167;7.67e-18;6!UBERON:0003135;2.37e-10;11!UBERON:0001041;1.86e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,2.55e-98,1;UBERON:0008811,2.55e-98,1;UBERON:0006258,2.55e-98,1;UBERON:0005876,2.55e-98,1;UBERON:0004874,2.55e-98,1;UBERON:0001044,7.67e-18,6;UBERON:0003293,7.67e-18,6;UBERON:0003294,7.67e-18,6;UBERON:0010047,7.67e-18,6;UBERON:0000167,7.67e-18,6;UBERON:0003408,2.73e-11,10;UBERON:0003135,2.37e-10,11;UBERON:0004876,2.37e-10,11 | |||
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|short_description=p20@KRT10 | |||
}} | }} |
Latest revision as of 03:43, 20 September 2015
Short description: | p20@KRT10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_KRT10_5end |
Coexpression cluster: | C202_salivary_skin_penis_tongue_uterus_cervical_immature |
Association with transcript: | -364bp_to_ENST00000459776_5end |
EntrezGene: | KRT10 |
HGNC: | 6413 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 4.27e-34 | 3 |
acinar cell | 4.21e-21 | 5 |
protein secreting cell | 7.67e-18 | 6 |
glandular epithelial cell | 2.19e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
penis | 2.55e-98 | 1 |
intromittent organ | 2.55e-98 | 1 |
lateral plate mesenchyme | 2.55e-98 | 1 |
undifferentiated genital tubercle | 2.55e-98 | 1 |
somatopleure | 2.55e-98 | 1 |
saliva-secreting gland | 7.67e-18 | 6 |
gland of oral region | 7.67e-18 | 6 |
gland of foregut | 7.67e-18 | 6 |
oral gland | 7.67e-18 | 6 |
oral cavity | 7.67e-18 | 6 |
gland of gut | 2.73e-11 | 10 |
male reproductive organ | 2.37e-10 | 11 |
urogenital ridge | 2.37e-10 | 11 |