FFCP PHASE1:Hg19::chr17:40704938..40704943,+: Difference between revisions
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|id=chr17:40704938..40704943,+
|short_description=p1@HSD17B1
|description=CAGE_peak_1_at_HSD17B1_5end
|association_with_transcript=0bp_to_ENST00000225928_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3292 | |EntrezGene=3292 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5210 | |HGNC=5210 | ||
|TSSclassifier=strong | |||
|UniProt=B4DU11 | |UniProt=B4DU11 | ||
|association_with_transcript=0bp_to_ENST00000225928_5end | |||
|cluster_id=chr17:40704938..40704943,+ | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_1_at_HSD17B1_5end | |||
|id=chr17:40704938..40704943,+ | |||
|ontology_enrichment_celltype=CL:0002541!1.26e-20!3;CL:0000039!2.50e-09!7;CL:0000586!2.50e-09!7 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.23e-45;3!CL:0000039;1.90e-20;7!CL:0000586;1.90e-20;7!CL:0000349;9.21e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.43e-45,3;CL:0000039,1.90e-20,7;CL:0000586,1.90e-20,7;CL:0000349,9.43e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;4.72e-17;1 | |||
|ontology_enrichment_disease=DOID:1036!4.26e-13!8;DOID:178!5.70e-08!1;DOID:326!5.70e-08!1;DOID:3978!5.70e-08!1;DOID:3394!5.70e-08!1;DOID:5844!5.70e-08!1;DOID:3371!1.75e-07!1;DOID:4549!1.75e-07!1;DOID:5861!1.75e-07!1;DOID:6496!1.75e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:178;2.84e-16;1!DOID:326;2.84e-16;1!DOID:3978;2.84e-16;1!DOID:3394;2.84e-16;1!DOID:5844;2.84e-16;1!DOID:114;8.41e-09;2!DOID:3095;6.62e-07;22!DOID:2994;6.62e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:178,2.63e-16,1;DOID:326,2.63e-16,1;DOID:3978,2.63e-16,1;DOID:3394,2.63e-16,1;DOID:5844,2.63e-16,1;DOID:114,8.09e-09,2;DOID:3095,6.62e-07,22;DOID:2994,6.62e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.26e-20!3;UBERON:0000920!1.26e-20!3;UBERON:0003124!1.29e-15!7;UBERON:0005631!9.66e-12!14;UBERON:0000158!9.66e-12!14;UBERON:0001882!1.35e-07!1;UBERON:0005403!1.35e-07!1;UBERON:0007190!1.99e-07!1;UBERON:0000478!9.58e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.23e-45;3!UBERON:0000920;1.23e-45;3!UBERON:0005631;3.20e-14;10!UBERON:0000158;3.20e-14;10!UBERON:0000478;1.77e-10;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.43e-45,3;UBERON:0003124,5.68e-35,7;UBERON:0005631,1.04e-17,14;UBERON:0000158,1.04e-17,14;UBERON:0000478,1.81e-10,24 | |||
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|short_description=p1@HSD17B1 | |||
}} | }} |
Latest revision as of 15:00, 24 September 2015
Short description: | p1@HSD17B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HSD17B1_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_ENST00000225928_5end |
EntrezGene: | HSD17B1 |
HGNC: | 5210 |
UniProt: | B4DU11 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.43e-45 | 3 |
germ line cell | 1.90e-20 | 7 |
germ cell | 1.90e-20 | 7 |
extraembryonic cell | 9.43e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.43e-45 | 3 |
chorion | 5.68e-35 | 7 |
extraembryonic membrane | 1.04e-17 | 14 |
membranous layer | 1.04e-17 | 14 |
extraembryonic structure | 1.81e-10 | 24 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 2.63e-16 | 1 |
ischemia | 2.63e-16 | 1 |
extrinsic cardiomyopathy | 2.63e-16 | 1 |
myocardial ischemia | 2.63e-16 | 1 |
myocardial infarction | 2.63e-16 | 1 |
heart disease | 8.09e-09 | 2 |
germ cell and embryonal cancer | 6.62e-07 | 22 |
germ cell cancer | 6.62e-07 | 22 |