FFCP PHASE1:Hg19::chr3:12329358..12329393,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5468 | |EntrezGene=5468 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9236 | |HGNC=9236 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000309576_5end | |association_with_transcript=0bp_to_ENST00000309576_5end | ||
|cluster_id=chr3:12329358..12329393,+ | |||
|description=CAGE_peak_3_at_PPARG_5end | |description=CAGE_peak_3_at_PPARG_5end | ||
|id=chr3:12329358..12329393,+ | |id=chr3:12329358..12329393,+ | ||
|ontology_enrichment_celltype=CL:0000860!5.01e-08!45;CL:0002194!3.30e-07!63;CL:0000576!3.30e-07!63;CL:0000040!3.30e-07!63;CL:0000559!3.30e-07!63;CL:0002057!3.32e-07!42 | |ontology_enrichment_celltype=CL:0000860!5.01e-08!45;CL:0002194!3.30e-07!63;CL:0000576!3.30e-07!63;CL:0000040!3.30e-07!63;CL:0000559!3.30e-07!63;CL:0002057!3.32e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.35e-11;33!CL:0002057;1.35e-11;33!CL:0000473;8.36e-11;39!CL:0000234;8.36e-11;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.78e-08,48;CL:0000234,3.78e-08,48;CL:0000860,8.77e-07,42;CL:0002057,8.77e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.34e-17!448;UBERON:0004120!1.34e-17!448;UBERON:0006603!1.34e-17!448;UBERON:0000062!4.47e-16!511;UBERON:0000467!7.73e-15!625;UBERON:0000468!1.15e-14!659;UBERON:0000480!1.52e-14!626;UBERON:0002050!6.35e-14!605;UBERON:0005423!6.35e-14!605;UBERON:0000923!8.83e-14!604;UBERON:0005291!8.83e-14!604;UBERON:0006598!8.83e-14!604;UBERON:0002532!8.83e-14!604;UBERON:0000922!4.92e-13!612;UBERON:0000481!1.20e-12!347;UBERON:0003104!3.83e-12!238;UBERON:0009142!3.83e-12!238;UBERON:0004119!2.59e-11!169;UBERON:0000925!2.59e-11!169;UBERON:0006595!2.59e-11!169;UBERON:0001007!9.55e-10!155;UBERON:0001555!9.55e-10!155;UBERON:0007026!9.55e-10!155;UBERON:0002100!1.23e-09!216;UBERON:0005256!3.84e-09!143;UBERON:0000077!6.72e-09!130;UBERON:0004921!1.18e-08!129;UBERON:0004185!1.18e-08!129;UBERON:0005177!2.58e-07!107;UBERON:0001048!5.60e-07!168;UBERON:0003103!7.12e-07!69 | |ontology_enrichment_uberon=UBERON:0000926!1.34e-17!448;UBERON:0004120!1.34e-17!448;UBERON:0006603!1.34e-17!448;UBERON:0000062!4.47e-16!511;UBERON:0000467!7.73e-15!625;UBERON:0000468!1.15e-14!659;UBERON:0000480!1.52e-14!626;UBERON:0002050!6.35e-14!605;UBERON:0005423!6.35e-14!605;UBERON:0000923!8.83e-14!604;UBERON:0005291!8.83e-14!604;UBERON:0006598!8.83e-14!604;UBERON:0002532!8.83e-14!604;UBERON:0000922!4.92e-13!612;UBERON:0000481!1.20e-12!347;UBERON:0003104!3.83e-12!238;UBERON:0009142!3.83e-12!238;UBERON:0004119!2.59e-11!169;UBERON:0000925!2.59e-11!169;UBERON:0006595!2.59e-11!169;UBERON:0001007!9.55e-10!155;UBERON:0001555!9.55e-10!155;UBERON:0007026!9.55e-10!155;UBERON:0002100!1.23e-09!216;UBERON:0005256!3.84e-09!143;UBERON:0000077!6.72e-09!130;UBERON:0004921!1.18e-08!129;UBERON:0004185!1.18e-08!129;UBERON:0005177!2.58e-07!107;UBERON:0001048!5.60e-07!168;UBERON:0003103!7.12e-07!69 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,6.85e-11,160;UBERON:0009142,6.85e-11,160;UBERON:0004119,6.92e-09,160;UBERON:0000925,6.92e-09,160;UBERON:0006595,6.92e-09,160;UBERON:0002100,2.45e-08,199;UBERON:0005256,1.75e-07,122;UBERON:0001007,2.61e-07,145;UBERON:0001555,2.61e-07,145;UBERON:0007026,2.61e-07,145;UBERON:0000922,3.89e-07,592;UBERON:0000926,5.67e-07,315;UBERON:0004120,5.67e-07,315;UBERON:0006603,5.67e-07,315 | |||
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| ||
|short_description=p3@PPARG | |short_description=p3@PPARG | ||
}} | }} |
Latest revision as of 01:05, 20 September 2015
Short description: | p3@PPARG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PPARG_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000309576_5end |
EntrezGene: | PPARG |
HGNC: | 9236 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.78e-08 | 48 |
phagocyte | 3.78e-08 | 48 |
classical monocyte | 8.77e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.77e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 6.85e-11 | 160 |
entire embryonic mesenchyme | 6.85e-11 | 160 |
endoderm-derived structure | 6.92e-09 | 160 |
endoderm | 6.92e-09 | 160 |
presumptive endoderm | 6.92e-09 | 160 |
trunk | 2.45e-08 | 199 |
trunk mesenchyme | 1.75e-07 | 122 |
digestive system | 2.61e-07 | 145 |
digestive tract | 2.61e-07 | 145 |
primitive gut | 2.61e-07 | 145 |
embryo | 3.89e-07 | 592 |
mesoderm | 5.67e-07 | 315 |
mesoderm-derived structure | 5.67e-07 | 315 |
presumptive mesoderm | 5.67e-07 | 315 |