FFCP PHASE1:Hg19::chr17:46655730..46655791,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:46655730..46655791,-
|short_description=p1@HOXB4
|description=CAGE_peak_1_at_HOXB4_5end
|association_with_transcript=0bp_to_NM_024015,uc002inp.2_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3214 | |EntrezGene=3214 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=5115 | |HGNC=5115 | ||
|TSSclassifier=strong | |||
|UniProt=P17483 | |UniProt=P17483 | ||
|association_with_transcript=0bp_to_NM_024015,uc002inp.2_5end | |||
|cluster_id=chr17:46655730..46655791,- | |||
|description=CAGE_peak_1_at_HOXB4_5end | |||
|id=chr17:46655730..46655791,- | |||
|ontology_enrichment_celltype=CL:0000222!2.10e-10!119 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.69e-10,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!8.79e-10!69;UBERON:0003914!2.29e-08!118;UBERON:0001981!2.55e-08!60;UBERON:0007500!2.55e-08!60;UBERON:0004537!2.55e-08!60;UBERON:0006965!2.55e-08!60;UBERON:0004872!6.67e-08!84;UBERON:0004290!9.23e-07!70 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.65e-09,68;UBERON:0007500,7.01e-08,59;UBERON:0001981,7.01e-08,59;UBERON:0004537,7.01e-08,59;UBERON:0006965,7.01e-08,59;UBERON:0003914,1.74e-07,117;UBERON:0003104,4.36e-07,160;UBERON:0009142,4.36e-07,160 | |||
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| ||
|short_description=p1@HOXB4 | |||
}} | }} |
Latest revision as of 07:03, 25 September 2015
Short description: | p1@HOXB4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HOXB4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_024015, uc002inp.2_5end |
EntrezGene: | HOXB4 |
HGNC: | 5115 |
UniProt: | P17483 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.69e-10 | 121 |
Ontology term | p-value | n |
---|---|---|
vessel | 1.65e-09 | 68 |
epithelial tube open at both ends | 7.01e-08 | 59 |
blood vessel | 7.01e-08 | 59 |
blood vasculature | 7.01e-08 | 59 |
vascular cord | 7.01e-08 | 59 |
epithelial tube | 1.74e-07 | 117 |
mesenchyme | 4.36e-07 | 160 |
entire embryonic mesenchyme | 4.36e-07 | 160 |