FFCP PHASE1:Hg19::chr17:47074540..47074570,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:47074540..47074570,+
|short_description=p2@IGF2BP1
|description=CAGE_peak_2_at_IGF2BP1_5end
|association_with_transcript=-203bp_to_ENST00000290341,NM_0011...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10642 | |EntrezGene=10642 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28866 | |HGNC=28866 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NZI8,C9JT33 | |UniProt=Q9NZI8,C9JT33 | ||
|association_with_transcript=-203bp_to_ENST00000290341,NM_001160423,NM_006546,uc002iom.2,uc010dbj.2_5end | |||
|cluster_id=chr17:47074540..47074570,+ | |||
|coexpression_cluster_id=C2416 | |||
|description=CAGE_peak_2_at_IGF2BP1_5end | |||
|id=chr17:47074540..47074570,+ | |||
|ontology_enrichment_celltype=CL:0002321!8.03e-08!248;CL:0002319!9.60e-08!25;CL:0000066!1.06e-07!254;CL:0000055!3.23e-07!180;CL:0000220!3.48e-07!246;CL:0000243!5.36e-07!15;CL:0000125!5.36e-07!15;CL:0000030!5.36e-07!15;CL:0000339!5.36e-07!15;CL:0000039!6.05e-07!7;CL:0000586!6.05e-07!7;CL:0000548!7.03e-07!679;CL:0000004!7.03e-07!679;CL:0000255!7.03e-07!679;CL:0000095!8.56e-07!17;CL:0000123!8.56e-07!17 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.54e-09;25!CL:0000039;5.20e-09;7!CL:0000586;5.20e-09;7!CL:0000243;1.40e-08;15!CL:0000125;1.40e-08;15!CL:0000095;1.91e-08;17!CL:1000449;1.15e-07;15!CL:0002322;1.59e-07;5!CL:0002321;2.65e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.42e-09,25;CL:0000066,3.43e-09,253;CL:0000039,4.98e-09,7;CL:0000586,4.98e-09,7;CL:0000243,1.44e-08,15;CL:0000125,1.44e-08,15;CL:0000030,1.44e-08,15;CL:0000339,1.44e-08,15;CL:0000095,1.67e-08,17;CL:0000123,1.67e-08,17;CL:0000133,1.83e-08,59;CL:0000333,1.14e-07,41;CL:1000449,1.19e-07,15;CL:0002322,1.62e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000339;1.40e-08;15 | |||
|ontology_enrichment_disease=DOID:3095!3.56e-13!22;DOID:2994!3.56e-13!22;DOID:0050687!4.31e-13!143;DOID:14566!4.52e-12!239;DOID:162!5.15e-12!235 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.03e-18;22!DOID:2994;2.03e-18;22!DOID:171;3.71e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.98e-18,22;DOID:2994,1.98e-18,22;DOID:0050687,7.13e-18,143;DOID:14566,4.45e-16,239;DOID:162,9.57e-16,235;DOID:171,3.76e-08,10;DOID:305,1.86e-07,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000019;4.98e-08;19!UBERON:0000047;4.98e-08;19!UBERON:0004088;4.98e-08;19!UBERON:0010230;4.98e-08;19!UBERON:0007625;5.36e-08;11!UBERON:0006555;1.15e-07;15!UBERON:0004819;1.15e-07;15!UBERON:0001285;1.15e-07;15!UBERON:0007684;1.15e-07;15!UBERON:0000970;1.91e-07;20!UBERON:0001737;3.70e-07;9!UBERON:0001557;3.70e-07;9!UBERON:0002104;6.38e-07;21!UBERON:0001456;6.38e-07;21!UBERON:0002113;7.49e-07;24!UBERON:0011143;7.49e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,2.75e-08,11;UBERON:0005172,3.42e-08,54;UBERON:0005173,3.42e-08,54;UBERON:0000019,1.16e-07,20;UBERON:0000047,1.16e-07,20;UBERON:0010312,1.16e-07,20;UBERON:0004088,1.16e-07,20;UBERON:0010230,1.16e-07,20;UBERON:0003072,1.16e-07,20;UBERON:0004128,1.16e-07,20;UBERON:0003071,1.16e-07,20;UBERON:0004211,1.19e-07,15;UBERON:0009773,1.19e-07,15;UBERON:0001231,1.19e-07,15;UBERON:0001285,1.19e-07,15;UBERON:0007684,1.19e-07,15;UBERON:0004208,1.19e-07,15;UBERON:0001737,1.78e-07,9;UBERON:0000970,4.00e-07,21;UBERON:0002104,4.00e-07,21;UBERON:0006555,5.44e-07,16;UBERON:0004819,5.44e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,6.88055022204225,9.76921635161399,1.52908960491121,0.791300934685361,0.495065411840187,0,0,0,0,0.975865597581014,3.57051068422685,2.44800829493104,3.44800193625897,1.14494394852423,0.821246550437305,1.88313959392204,0.458480434487708,0.57470412614962,0.708397031823113,0,0,0,0,0,0,0.92960640696362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35350429851818,0.255725123687061,0,0.50133791063589,0,0,0,2.6469748805939,1.55210578223795,3.77689578480442,0.196468613246569,0,0,0,0,0,0,0,0,0.596287222100115,0,0,0,0,0.550236083880135,0.626984899610432,0,0,0.66944122552934,0,0,0.24406205754817,0,0.81014194788176,0.892997282840798,1.12264686313085,1.80178368773316,1.53316637465883,0,1.28241220751285,0,0,0.436094052142534,0,0.12663051166458,0,0.286836620748814,0,0.560677600142307,1.06748995729705,1.97334038733728,0.933633106199299,0.538842688278752,0.653847612453835,0.151357427644931,1.15235184896,3.51482147750695,0,0,0,0.939475989150119,1.13311061057692,1.40450806702248,0,1.35117749042945,0,0,0,0,0,0.168336113954066,1.12606667884768,0,0,0,0,0.680593098960126,0.358779271377724,0,0,0,0.309157587715317,0.515281080091258,0,0.506328996723799,0.487185025805993,0,0.184099797284599,0.161646056818812,1.06502877754984,0.302256294682921,0.169560592310488,0,0,0,22.321188221716,18.6866973333294,17.8938672019058,16.0674635273824,18.9240638156721,27.3733019306872,0,0,0,0.464367928031979,0,2.48444280083672,2.36018566109342,1.68707720918437,1.43382164552112,2.61455332910887,1.18635309555548,1.75280700608214,1.96221465125346,1.53898862778556,1.4763109092493,2.80483547606892,0.8231480226628,2.94017422771084,0,0,0,0,17.2183813960359,1.88724591328378,0,0,0,2.12953423864618,2.93227474779292,0,0,2.08674728955138,1.6437217193015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56983518083505,0.43596006883328,1.1734125731352,0.517086863031111,0,0,0,0,3.08648849114571,5.67396528093113,1.8649552531127,0,0.542621605391443,0.823240336780769,0,0,2.37585561880029,0,0,0,0,0,0,0.718874566474748,1.14861935834114,0,0,0.410952645100767,0,0,0,0,0,0,1.30139853857622,0,0.335032530668698,0,0,0,0,0.12269149171914,0.500170521059677,0.813795071099207,0,0,0.157702415033935,0,0,0,0,3.32112799267718,1.10621501125022,0.173767228936166,0.587403472388222,1.02943027143257,0,0,0,0.909382714338778,1.66435439510497,1.20956117331872,0,0,0,0,0,0,0,0.308419387605311,0,0.328508624055237,0.519254429183621,0.232420756919918,22.3589981744501,0,0,0.114814448164607,0,0,4.06079651616671,1.23224539367064,6.27479815341484,5.84556898613043,1.16106791782163,1.13733384070897,1.87103075804167,0.647747748306418,1.54227252690289,2.43851793789468,1.50506932156456,0,0,4.02974558499921,0,0,2.56450125116389,5.9042636225947,3.57916234130733,0,0.824125183365091,1.23764249880882,0,0,0,1.16004861950546,0.616194468458578,0.614014698904518,1.65403886981437,0.429680979473094,0,1.44885266607372,1.15741646340759,0,0,0,0,0,0.94443704049192,0,0,0,0,0,0.143124886741991,0,0.632758849437452,0.571890581771475,2.303080121802,0,0,0,0.719489830333259,0.54907405947211,0.706874414074119,0,0,0,4.8763373908959,0.243713489631284,1.05650146756755,0.272999822815972,0.424216295861138,0,0,0,0,0,0,0.405820753925408,1.8589409885985,0.563391205064483,1.43411352204052,1.08073945114433,0.35667105148125,0,0,0,3.03578539012572,1.39973888097993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2847681796594,0,0,0,0,0,3.18852545457645,0,0.191505370132367,0,0,0,1.14117339516596,6.26719583092093,0,0,0.802940375518498,0.403599414382095,0,0,0,0,0,0,0,0,0,23.981181695843,0,0,0,5.94666556572616,0,0,0,0.296964680832639,0,0,0,0,0.494411622680279,1.47787785689595,0,0,1.76352923497993,0,2.21552649829925,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,28.8688567249422,0,0,0,0,0,0,0,0.21787692703798,0.139423744278603,0,0,14.0643981676717,14.8100113276124,8.80043712568265,0,0,0,0,0,0,23.4619487041868,27.4487548044835,26.3479891552073,23.9089703232473,0,2.3209787098083,0,28.69467350109,10.6030433473625,0,0,0,3.26173241548684,2.10058696209055,3.9680340812073,0,0.802577647298789,0,0,0.782658475728359,0,0,0,0,0,7.9671412289681,10.2651309483275,0,0,1.2557316736289,0,15.6535250316386,0,0,0,0,0,1.54787429224455,0.580537987734511,0.584714536689484,0.492692742319255,0,0,0,3.15196426687527,4.17300684576278,0,2.73771935828724,0,0,1.59847687665704,0.576361668616424,6.52858598145719,0,0,0.248505071130865,1.88555227693436,7.88244395226961,6.38077362505233,0,6.35691297783342,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.53746777989381,0,20.9692709149417,28.4407288129077,26.5379063987356,24.5348899629233,3.24810688998671,0,0,0,26.0420100513331,34.9350168956974,39.8822724508018,0,0,0,0,0,0.0524545881349981,0.950403028674658,0,0,0,0,0,0,0,0,4.7892076624995,0.082092520749339,1.19271615249795,2.60617810496289,0,2.65013777824443,0,0,5.13260513652988,0,0,0.157204305099666,0,0,0.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| ||
|short_description=p2@IGF2BP1 | |||
}} | }} |
Latest revision as of 19:37, 15 September 2015
Short description: | p2@IGF2BP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IGF2BP1_5end |
Coexpression cluster: | C2416_peripheral_iPS_hepatocellular_carcinoid_small_colon_HES3GFP |
Association with transcript: | -203bp_to_ENST00000290341, NM_001160423, NM_006546, uc002iom.2, uc010dbj.2_5end |
EntrezGene: | IGF2BP1 |
HGNC: | 28866 |
UniProt: | Q9NZI8C9JT33 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.42e-09 | 25 |
epithelial cell | 3.43e-09 | 253 |
germ line cell | 4.98e-09 | 7 |
germ cell | 4.98e-09 | 7 |
glial cell (sensu Vertebrata) | 1.44e-08 | 15 |
glial cell | 1.44e-08 | 15 |
glioblast | 1.44e-08 | 15 |
glioblast (sensu Vertebrata) | 1.44e-08 | 15 |
neuron associated cell | 1.67e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 1.67e-08 | 17 |
neurectodermal cell | 1.83e-08 | 59 |
migratory neural crest cell | 1.14e-07 | 41 |
epithelial cell of nephron | 1.19e-07 | 15 |
embryonic stem cell | 1.62e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 2.75e-08 | 11 |
abdomen element | 3.42e-08 | 54 |
abdominal segment element | 3.42e-08 | 54 |
camera-type eye | 1.16e-07 | 20 |
simple eye | 1.16e-07 | 20 |
immature eye | 1.16e-07 | 20 |
ocular region | 1.16e-07 | 20 |
eyeball of camera-type eye | 1.16e-07 | 20 |
optic cup | 1.16e-07 | 20 |
optic vesicle | 1.16e-07 | 20 |
eye primordium | 1.16e-07 | 20 |
nephron epithelium | 1.19e-07 | 15 |
renal tubule | 1.19e-07 | 15 |
nephron tubule | 1.19e-07 | 15 |
nephron | 1.19e-07 | 15 |
uriniferous tubule | 1.19e-07 | 15 |
nephrogenic mesenchyme | 1.19e-07 | 15 |
larynx | 1.78e-07 | 9 |
eye | 4.00e-07 | 21 |
visual system | 4.00e-07 | 21 |
excretory tube | 5.44e-07 | 16 |
kidney epithelium | 5.44e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.98e-18 | 22 |
germ cell cancer | 1.98e-18 | 22 |
cell type cancer | 7.13e-18 | 143 |
disease of cellular proliferation | 4.45e-16 | 239 |
cancer | 9.57e-16 | 235 |
neuroectodermal tumor | 3.76e-08 | 10 |
carcinoma | 1.86e-07 | 106 |