FFCP PHASE1:Hg19::chr17:48185357..48185403,+: Difference between revisions
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|id=chr17:48185357..48185403,+
|short_description=p13@PDK2
|description=CAGE_peak_13_at_PDK2_5end
|association_with_transcript=0bp_to_ENST00000506647,ENST0000051220...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5164 | |EntrezGene=5164 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8810 | |HGNC=8810 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000506647,ENST00000512204_5end | |||
|cluster_id=chr17:48185357..48185403,+ | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_13_at_PDK2_5end | |||
|id=chr17:48185357..48185403,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.42e-15!254;CL:0002076!5.65e-14!43;CL:0002159!6.78e-13!13;CL:0000076!1.19e-12!62;CL:0002368!6.46e-12!13;CL:0002328!2.57e-09!3;CL:0000622!2.62e-09!5;CL:0002166!3.58e-09!3;CL:0002251!4.51e-09!21;CL:0000223!4.83e-09!59;CL:0002150!6.01e-09!3;CL:0000861!6.01e-09!3;CL:0000154!9.56e-08!6;CL:0002202!1.11e-07!9;CL:0002632!1.11e-07!9;CL:0002327!4.40e-07!4;CL:0000317!5.78e-07!2;CL:1000448!5.78e-07!2;CL:0002308!5.78e-07!2;CL:0002140!5.78e-07!2;CL:0000575!7.06e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000317;8.54e-23;2!CL:1000448;8.54e-23;2!CL:0002308;8.54e-23;2!CL:0002140;8.54e-23;2!CL:0000349;5.16e-21;19!CL:0002577;4.46e-16;3!CL:0002537;3.80e-10;5!CL:0000622;1.06e-09;5!CL:0000154;3.13e-08;6!CL:0002159;1.34e-07;14!CL:0002536;9.01e-07;2!CL:0000575;9.01e-07;2!CL:0002535;9.01e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,1.19e-22,2;CL:1000448,1.19e-22,2;CL:0002308,1.19e-22,2;CL:0002140,1.19e-22,2;CL:0000349,5.64e-21,19;CL:0002577,4.30e-16,3;CL:0002537,3.80e-10,5;CL:0000622,1.21e-09,5;CL:0000154,3.50e-08,6;CL:0000076,6.85e-08,63;CL:0000066,1.08e-07,253;CL:0002159,1.34e-07,14;CL:0000575,7.61e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!4.82e-22!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;9.49e-13;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,7.89e-13,14 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.48e-15!14;UBERON:0000158!1.48e-15!14;UBERON:0000305!2.25e-10!7;UBERON:0004815!2.57e-09!3;UBERON:0002031!2.57e-09!3;UBERON:0003729!3.18e-09!5;UBERON:0004871!5.11e-09!8;UBERON:0000478!2.87e-08!24;UBERON:0004121!1.10e-07!169;UBERON:0004923!1.36e-07!57;UBERON:0001004!1.52e-07!72;UBERON:0000924!2.41e-07!173;UBERON:0006601!2.41e-07!173;UBERON:0001987!2.98e-07!4;UBERON:0004340!2.98e-07!4;UBERON:0000166!4.28e-07!21;UBERON:0001911!4.40e-07!4;UBERON:0005333!4.40e-07!4;UBERON:0008425!4.40e-07!4;UBERON:0005311!4.40e-07!4;UBERON:0002185!4.59e-07!4;UBERON:0003124!5.30e-07!7;UBERON:0002419!5.78e-07!2;UBERON:0007771!5.78e-07!2;UBERON:0003297!5.78e-07!2;UBERON:0001821!5.78e-07!2;UBERON:0003487!5.78e-07!2;UBERON:0001820!5.78e-07!2;UBERON:0005089!5.78e-07!2;UBERON:0005088!5.78e-07!2;UBERON:0001708!5.85e-07!4;UBERON:0001704!5.85e-07!4;UBERON:0003343!6.34e-07!4;UBERON:0004785!6.34e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;8.54e-23;2!UBERON:0007771;8.54e-23;2!UBERON:0003297;8.54e-23;2!UBERON:0001821;8.54e-23;2!UBERON:0003487;8.54e-23;2!UBERON:0001820;8.54e-23;2!UBERON:0005631;2.62e-18;10!UBERON:0000158;2.62e-18;10!UBERON:0000478;1.43e-16;24!UBERON:0000305;3.97e-15;7!UBERON:0001987;2.68e-12;4!UBERON:0003343;6.73e-12;4!UBERON:0004785;6.73e-12;4!UBERON:0000974;3.13e-08;6!UBERON:0003729;3.79e-08;13!UBERON:0004923;4.24e-07;55!UBERON:0006955;9.01e-07;2!UBERON:0004801;9.01e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.47e-28,14;UBERON:0000158,1.47e-28,14;UBERON:0002419,1.19e-22,2;UBERON:0007771,1.19e-22,2;UBERON:0003297,1.19e-22,2;UBERON:0001821,1.19e-22,2;UBERON:0003487,1.19e-22,2;UBERON:0001820,1.19e-22,2;UBERON:0005089,1.19e-22,2;UBERON:0005088,1.19e-22,2;UBERON:0000478,1.53e-16,24;UBERON:0003124,3.61e-15,7;UBERON:0000305,4.81e-15,7;UBERON:0004871,3.07e-13,8;UBERON:0004923,1.27e-12,66;UBERON:0001987,2.61e-12,4;UBERON:0004340,2.61e-12,4;UBERON:0003343,4.09e-12,4;UBERON:0004785,4.09e-12,4;UBERON:0003729,2.96e-08,13 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.09220686065086,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67768489791571,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45718115317017,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,1.35282597214308,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.503946384596579,0.567100388969546,0.53735113621709,1.45316969256981,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,2.72814814301633,0,3.93107381328584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,1.30012049207304,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7748896947538,0.890894042497916,15.0508744028624,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0.796554137998498,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,2.87101043758728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881931576729399,1.21882889212564,0,0,0.387025325156341,0.365446585430928,0.656923656425674,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,2.12124631155116,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0.191915197319445,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,1.66851121451744,0,1.46742878817343,0.115525666150338,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828864656652147,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0.352894871715692,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p13@PDK2 | |||
}} | }} |
Latest revision as of 22:37, 15 September 2015
Short description: | p13@PDK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_PDK2_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 0bp_to_ENST00000506647, ENST00000512204_5end |
EntrezGene: | PDK2 |
HGNC: | 8810 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 1.19e-22 | 2 |
epithelial cell of sweat gland | 1.19e-22 | 2 |
epithelial cell of skin gland | 1.19e-22 | 2 |
acinar cell of sebaceous gland | 1.19e-22 | 2 |
extraembryonic cell | 5.64e-21 | 19 |
placental epithelial cell | 4.30e-16 | 3 |
amnion mesenchymal stem cell | 3.80e-10 | 5 |
acinar cell | 1.21e-09 | 5 |
protein secreting cell | 3.50e-08 | 6 |
squamous epithelial cell | 6.85e-08 | 63 |
epithelial cell | 1.08e-07 | 253 |
general ecto-epithelial cell | 1.34e-07 | 14 |
corneal epithelial cell | 7.61e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.47e-28 | 14 |
membranous layer | 1.47e-28 | 14 |
skin gland | 1.19e-22 | 2 |
epidermis gland | 1.19e-22 | 2 |
gland of integumental system | 1.19e-22 | 2 |
sebaceous gland | 1.19e-22 | 2 |
skin sebaceous gland | 1.19e-22 | 2 |
sweat gland | 1.19e-22 | 2 |
sweat gland placode | 1.19e-22 | 2 |
sebaceous gland placode | 1.19e-22 | 2 |
extraembryonic structure | 1.53e-16 | 24 |
chorion | 3.61e-15 | 7 |
amnion | 4.81e-15 | 7 |
somatic layer of lateral plate mesoderm | 3.07e-13 | 8 |
organ component layer | 1.27e-12 | 66 |
placenta | 2.61e-12 | 4 |
allantois | 2.61e-12 | 4 |
mucosa of oral region | 4.09e-12 | 4 |
respiratory system mucosa | 4.09e-12 | 4 |
mouth mucosa | 2.96e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 7.89e-13 | 14 |