FFCP PHASE1:Hg19::chr18:67715553..67715566,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25914 | |EntrezGene=25914 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=18654 | |HGNC=18654 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-253bp_to_AK129866_5end | |association_with_transcript=-253bp_to_AK129866_5end | ||
|cluster_id=chr18:67715553..67715566,- | |||
|description=CAGE_peak_10_at_RTTN_5end | |description=CAGE_peak_10_at_RTTN_5end | ||
|id=chr18:67715553..67715566,- | |id=chr18:67715553..67715566,- | ||
|ontology_enrichment_celltype=CL:0000144!9.20e-12!625;CL:0002371!4.34e-11!591;CL:0000548!1.53e-09!679;CL:0000004!1.53e-09!679;CL:0000255!1.53e-09!679;CL:0000012!2.30e-09!682;CL:0000055!9.68e-09!180;CL:0002368!9.62e-08!13;CL:0000003!1.20e-07!722;CL:0002620!1.63e-07!23;CL:0000723!2.91e-07!436;CL:0000057!4.59e-07!75;CL:0002202!8.68e-07!9;CL:0002632!8.68e-07!9;CL:0000034!8.92e-07!444 | |ontology_enrichment_celltype=CL:0000144!9.20e-12!625;CL:0002371!4.34e-11!591;CL:0000548!1.53e-09!679;CL:0000004!1.53e-09!679;CL:0000255!1.53e-09!679;CL:0000012!2.30e-09!682;CL:0000055!9.68e-09!180;CL:0002368!9.62e-08!13;CL:0000003!1.20e-07!722;CL:0002620!1.63e-07!23;CL:0000723!2.91e-07!436;CL:0000057!4.59e-07!75;CL:0002202!8.68e-07!9;CL:0002632!8.68e-07!9;CL:0000034!8.92e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000515;6.22e-24;3!CL:0000056;4.14e-18;4!CL:0000307;3.98e-11;3!CL:0000680;1.38e-10;7!CL:0002368;1.39e-09;13!CL:0002327;9.36e-09;4!CL:0002202;3.54e-08;9!CL:0002632;3.54e-08;9!CL:0000860;4.21e-07;33!CL:0002057;4.21e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,4.67e-18,4;CL:0000068,6.99e-11,3;CL:0000069,6.99e-11,3;CL:0000307,6.99e-11,3;CL:0000377,6.99e-11,3;CL:0002368,1.56e-09,13;CL:0002327,7.88e-09,4;CL:0000860,3.40e-08,42;CL:0002057,3.40e-08,42;CL:0002202,3.92e-08,9;CL:0002632,3.92e-08,9;CL:0000473,4.52e-07,48;CL:0000234,4.52e-07,48 | |||
|ontology_enrichment_development_v019=CL:0000515;4.14e-18;4!CL:0000377;3.98e-11;3 | |||
|ontology_enrichment_disease=DOID:17!4.38e-08!5;DOID:450!4.38e-08!5;DOID:66!4.38e-08!5;DOID:423!4.38e-08!5;DOID:0080000!4.38e-08!5;DOID:11722!4.38e-08!5 | |ontology_enrichment_disease=DOID:17!4.38e-08!5;DOID:450!4.38e-08!5;DOID:66!4.38e-08!5;DOID:423!4.38e-08!5;DOID:0080000!4.38e-08!5;DOID:11722!4.38e-08!5 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004573!8.29e-07!33;UBERON:0004571!8.29e-07!33;UBERON:0003102!9.24e-07!95 | |ontology_enrichment_uberon=UBERON:0004573!8.29e-07!33;UBERON:0004571!8.29e-07!33;UBERON:0003102!9.24e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0001911;9.36e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,7.88e-09,4;UBERON:0005333,7.88e-09,4;UBERON:0008425,7.88e-09,4;UBERON:0005311,7.88e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.6024118375565,0.369754010166788,0,0,0,1.10799081706375,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0.575384784644301,1.0246428261164,0.236482229888585,0.344745680736619,0.645484683583826,0,0,0,0,1.22433556948361,0.641858054152187,1.91801137739712,0,0,0,1.7412554317715,0.56738522469114,0.622822248995575,0,0,0,0,3.68277635987565,1.58231193720442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0.795285947051099,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.794455084879313,2.0078563452417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0.358779271377724,0.427114777637135,0.211931901159562,0.900273288253207,0.309157587715317,0.257640540045629,0,3.03797398034279,0.487185025805993,0.504867548488229,0,0.161646056818812,0,0.503760491138201,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768251997860379,0,0.804231779293047,0.277765335475589,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0.503946384596579,0.850650583454319,2.5971971583826,1.45316969256981,0.383382679165211,0,0,0,0,0,0,0.381988425558278,0,0,0.925447434329912,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,0,0,0,1.30303176000821,1.2328579353023,3.22309733831812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.384417447767103,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0.601519410909855,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,1.14853107599234,0.650060246036521,0,0.096670718292122,0,0,0.275673144969061,0,0,0.0852266274161009,0.0890320356467374,0.495854746082934,0,1.27612712494584,0,0,2.20368642781448,0.6970372701606,0.616067160352178,0,0,0.18532421910392,0.429374660225974,0,0,0,0,0,0.636406495851874,1.56989728039846,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,1.05650146756755,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,1.15466535270614,0,1.08890984861323,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56010021552684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569710279235006,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435296032902013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0.754703705257725,0,0.457680136793847,0.151230923763239,0,0.443565449968902,0.318593534327405,1.34940933649081,0.310525913752519,0,0.265841714557995,0,0.751288044986092,0.761610424337591,0,0,0.537052785212442,1.85613503951397,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,1.31570429747224,0.706756583783524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0.62164849248911,0.3414369541879,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p10@RTTN | |short_description=p10@RTTN | ||
}} | }} |
Latest revision as of 06:56, 20 September 2015
Short description: | p10@RTTN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RTTN_5end |
Coexpression cluster: | NA |
Association with transcript: | -253bp_to_AK129866_5end |
EntrezGene: | RTTN |
HGNC: | 18654 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 4.67e-18 | 4 |
duct epithelial cell | 6.99e-11 | 3 |
branched duct epithelial cell | 6.99e-11 | 3 |
tracheal epithelial cell | 6.99e-11 | 3 |
tracheoblast | 6.99e-11 | 3 |
respiratory epithelial cell | 1.56e-09 | 13 |
mammary gland epithelial cell | 7.88e-09 | 4 |
classical monocyte | 3.40e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.40e-08 | 42 |
epithelial cell of tracheobronchial tree | 3.92e-08 | 9 |
epithelial cell of lower respiratory tract | 3.92e-08 | 9 |
defensive cell | 4.52e-07 | 48 |
phagocyte | 4.52e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 7.88e-09 | 4 |
mammary bud | 7.88e-09 | 4 |
mammary ridge | 7.88e-09 | 4 |
mammary placode | 7.88e-09 | 4 |